WormBase Tree Display for Sequence: Y70C5C
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| Y70C5C | DNA | Y70C5C | 20639 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00013493 | 3295 | 1690 | |
| WBGene00077621 | 9211 | 7838 | ||||
| WBGene00005354 | 13320 | 12126 | ||||
| WBGene00023516 | 6623 | 7424 | ||||
| WBGene00003702 | 20490 | 18707 | ||||
| WBGene00013495 | 15064 | 18639 | ||||
| WBGene00013494 | 11841 | 10093 | ||||
| CDS_child (70) | ||||||
| Transcript | Y70C5C.2.1 | 3295 | 1690 | |||
| Y70C5C.4.1 | 13320 | 12126 | ||||
| Y70C5C.6.1 | 20490 | 18707 | ||||
| Pseudogene | Y70C5C.3 | 11841 | 10093 | |||
| Y70C5C.5 | 15064 | 18639 | ||||
| Y70C5C.7 | 6623 | 7424 | ||||
| Y70C5C.8 | 9211 | 7838 | ||||
| PCR_product (20) | ||||||
| Allele (485) | ||||||
| Oligo_set | Aff_Y70C5C.1 | 332 | 1017 | |||
| Aff_Y70C5C.2 | 2327 | 1728 | ||||
| Aff_Y70C5C.3 | 11616 | 10095 | ||||
| Aff_Y70C5C.4 | 12725 | 12126 | ||||
| Aff_Y70C5C.5 | 16650 | 17561 | ||||
| Aff_Y70C5C.6 | 19894 | 18799 | ||||
| Feature_object | WBsf1002503 | 3688 | 3838 | |||
| WBsf003137 | 20491 | 20490 | ||||
| WBsf026824 | 19174 | 19173 | ||||
| WBsf026897 | 18729 | 18724 | ||||
| WBsf099851 | 19762 | 19762 | ||||
| WBsf099852 | 20366 | 20366 | ||||
| WBsf103072 | 16195 | 16195 | ||||
| WBsf104410 | 19498 | 19498 | ||||
| WBsf190155 | 19498 | 19498 | ||||
| WBsf192052 | 19762 | 19762 | ||||
| WBsf192053 | 20366 | 20366 | ||||
| WBsf192582 | 20359 | 20359 | ||||
| WBsf195857 | 20023 | 20023 | ||||
| WBsf233123 | 1018 | 1070 | ||||
| WBsf233124 | 18640 | 18702 | ||||
| WBsf235155 | 18798 | 18706 | ||||
| WBsf254315 | 18660 | 18659 | ||||
| WBsf254316 | 18700 | 18699 | ||||
| WBsf256406 | 1072 | 1073 | ||||
| WBsf256407 | 1688 | 1687 | ||||
| WBsf256408 | 12109 | 12108 | ||||
| WBsf277481 | 18700 | 18701 | ||||
| WBsf632135 | 18687 | 18686 | ||||
| WBsf634652 | 18716 | 18715 | ||||
| WBsf967891 | 11265 | 11266 | ||||
| WBsf979592 | 18708 | 18707 | ||||
| WBsf506538 | 622 | 888 | ||||
| WBsf508388 | 5268 | 5815 | ||||
| WBsf515856 | 1559 | 1886 | ||||
| WBsf531085 | 1612 | 1874 | ||||
| WBsf532628 | 19715 | 19879 | ||||
| WBsf533505 | 5265 | 5815 | ||||
| WBsf533537 | 8929 | 8968 | ||||
| WBsf534509 | 4472 | 4673 | ||||
| WBsf549759 | 548 | 639 | ||||
| WBsf263768 | 11377 | 11429 | ||||
| Feature_data | Y70C5C:Polysome | 1 | 20639 | |||
| Y70C5C:TranscriptionallyActiveRegion | 1 | 20639 | ||||
| Y70C5C:ChIPSeqTF | 1 | 20639 | ||||
| Y70C5C:TRF | 1 | 20639 | ||||
| Y70C5C:Dust | 1 | 20639 | ||||
| Y70C5C:inverted | 1 | 20639 | ||||
| Homol_data (18) | ||||||
| Structure | From | Source | CHROMOSOME_V | |||
| Overlap_right | T25E12 | 20536 | ||||
| Overlap_left | F14F8 | |||||
| Clone_left_end | T25E12 | 20536 | ||||
| Y70C5C | 1 | |||||
| Clone_right_end | F14F8 | 104 | ||||
| Y70C5C | 20639 | |||||
| DB_info | Database | EMBL | NDB_AC | Z99283 | ||
| NDB_SV | Z99283.1 | |||||
| Secondary_accession | Z98878 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Steward CA | ||||
| From_laboratory | HX | |||||
| Date_directory | 980122 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | Y70C5C | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | f0fb07001f6c7885ee3066beb1e36ca7 | ||||
| Status | Finished | 22 Jan 1998 00:00:00 | ||||
| Submitted | 17 Sep 1997 00:00:00 | |||||
| Annotated | 01 Jan 1980 00:00:00 | |||||
| Map | Sequence-V | Ends | Left | 9549 | ||
| Right | 9562 | |||||
| Interpolated_map_position | V | 11.0676 | ||||
| Assembly_tags | Finished Left | 4 | 1 | Y70C5C | ||
| Clone right end | 101 | 104 | F14F8 | |||
| Clone left end | 20539 | 20536 | T25E12 | |||
| Finished Right | 20639 | 20636 | Y70C5C | |||
| annotation | 3845 | 6110 | Tandem repeat. Restriction digest suggests assembly is correct. | |||
| Method | Genomic_canonical |
