WormBase Tree Display for Sequence: W01D2

W01D2 DNA: W01D2 26521
  SMap: S_child: Gene_child: WBGene00045372 820 743
        WBGene00220108 4188 4269
        WBGene00012179 14911 15533
        WBGene00045123 3895 3952
        WBGene00012182 11924 14287
        WBGene00012180 3702 306
        WBGene00012183 8379 8597
        WBGene00003651 17936 15529
        WBGene00012181 5379 7515
      CDS_child: W01D2.1 14911 15489
        W01D2.2a 17916 15638
        W01D2.2b 17916 15638
        W01D2.2c 16745 15638
        W01D2.2d 16745 15638
        W01D2.3:wp176 3644 2549
        W01D2.3a 3644 370
        W01D2.3b 2847 370
        W01D2.4 5379 7480
        W01D2.4:wp136 5394 7480
        W01D2.5a 12426 14053
        W01D2.5b 13150 14053
        W01D2.6 8379 8597
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g43n11_x30_II_m 16745 16165
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g27n11_x30_II_m 17916 15641
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_gW01D2.6 8379 8594
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g2_x30_II_p 15504 15659
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g13n11_x30_II_p 13150 13361
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g62n11_x30_II_m 16745 16156
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g10n11_x30_II_p 12426 14050
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g16n11_x30_II_p 12426 14050
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g1_x30_II_p 14994 15500
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g17n11_x30_II_m 17916 15641
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g17n11s2k50_x30_II_m 16745 16165
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g63n11_x30_II_m 16745 16156
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g2_x30_II_p 15504 15659
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g31n11_x30_II_m 17916 15641
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g65n11_x30_II_m 16798 16156
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g57n11_x30_II_p 13150 14050
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g29n11_x30_II_p 12426 14047
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g1_x30_II_p 15504 15659
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g13n11_x30_II_m 17916 15641
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g22_x30_II_p 12426 14050
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g112_x30_II_m 2578 424
        RNASEQ_embryo_him-8_20dC_post-L1_gW01D2.6 8379 8594
        RNASEQ_embryo_him-8_20dC_post-L1_g136_x30_II_p 12426 14038
        RNASEQ_embryo_him-8_20dC_post-L1_g8n11_x30_II_m 16798 16165
        RNASEQ_embryo_him-8_20dC_post-L1_g45n11_x30_II_m 17916 15641
        RNASEQ_embryo_him-8_20dC_post-L1_g6_x30_II_p 15504 15659
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g28_x30_II_m 3644 373
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g3_x30_II_p 15504 15659
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g51n11_x30_II_m 17916 16281
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g70_x30_II_m 16202 15641
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g181_x30_II_p 12426 14050
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g61n11_x30_II_p 13150 13361
        RNASEQ_L4_soma_JK1107_no_DNaseI_g50n11_x30_II_p 13150 13972
        RNASEQ_L4_soma_JK1107_no_DNaseI_g1_x30_II_p 14994 15500
        RNASEQ_L4_soma_JK1107_no_DNaseI_g33n11_x30_II_p 12426 13969
        RNASEQ_L4_soma_JK1107_no_DNaseI_g21n11_x30_II_m 17916 15674
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g23n11_x30_II_m 17916 15641
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g53n11_x30_II_m 16798 16156
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g3_x30_II_p 15504 15659
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g35n11_x30_II_p 12426 14050
        RNASEQ_early_embryo_g18_x30_II_p 15113 15955
        RNASEQ_early_embryo_g43n11_x30_II_m 16798 16165
        RNASEQ_early_embryo_g18e2k226_x30_II_p 15504 15659
        RNASEQ_early_embryo_g23n11_x30_II_m 17916 15641
        RNASEQ_early_embryo_g44n11_x30_II_p 12426 14050
        RNASEQ_early_embryo_gW01D2.6 8379 8594
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g30n11_x30_II_m 17916 15641
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g41n11_x30_II_m 16798 16165
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g58n11_x30_II_p 12426 14050
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g24n11_x30_II_m 17916 15641
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g1m2_x30_II_p 14911 15486
        RNASEQ_mid-L1_20dC_4hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g37n11_x30_II_p 12426 14050
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g1_x30_II_p 15113 15967
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g59n11_x30_II_m 16798 16156
        RNASEQ_mid-L2_25dC_14hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g54_x30_II_m 16745 15641
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g7_x30_II_p 14994 15500
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g40n11_x30_II_p 12426 14050
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g101_x30_II_p 13150 14050
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g5_x30t1_II_p 14994 15500
        RNASEQ_mid-L3_25dC_25hrs_post-L1_gW01D2.6 8379 8594
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g42_x30_II_m 16745 15641
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g2_x30_II_p 14994 15500
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g52n11_x30_II_m 2847 373
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g44n11_x30_II_p 13150 14050
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g120_x30_II_m 15800 15666
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g91_x30_II_m 15997 15845
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g55_x30_II_m 3372 2717
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g17n11_x30_II_p 13150 13361
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g25n11_x30_II_m 17916 15641
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g40n11_x30_II_m 16745 16165
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_gW01D2.6 8379 8594
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g13n11_x30_II_p 12426 14050
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g2_x30_II_p 15504 15659
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g143_x30_II_m 3123 2824
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g74n11_x30_II_m 16745 16156
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g15n11_x30_II_p 13150 14050
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g7n11_x30_II_p 12426 13361
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g28n11_x30_II_m 17916 15641
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g2_x30_II_p 15113 15553
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g42n11_x30_II_m 16745 16165
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g9n11_x30_II_p 12426 13361
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g2_x30_II_p 15113 15553
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g15n11_x30_II_p 13150 14050
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g39n11_x30_II_m 17916 15641
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g23n11_x30_II_m 17916 15641
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_gW01D2.6 8379 8594
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g17n11_x30_II_p 13150 13361
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g46n11_x30_II_m 16745 16165
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g1_x30_II_p 15504 15659
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g13n11_x30_II_p 12426 14050
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g59_x30_II_m 16745 15641
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g5_x30_II_p 14994 15500
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g22n11_x30_II_p 12426 14050
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g109_x30_II_m 3623 3438
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g27n11_x30_II_p 13150 13361
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g75_x30_II_m 16745 16165
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g53_x30_II_m 3372 373
        W01D2.gc1 3644 2549
        W01D2.gc2 12426 14053
        W01D2.gc3 14911 15489
        W01D2.gc4 17934 15638
        ContigII.elegans.jigsaw.3514.mRNA3514 17981 15538
        ContigII.elegans.jigsaw.3513.mRNA3513 14862 15531
        ContigII.elegans.jigsaw.3511.mRNA3511 8332 8667
        ContigII.elegans.jigsaw.3512.mRNA3512 12372 14282
        ContigII.elegans.jigsaw.3510.mRNA3510 5302 7642
        ContigII.elegans.jigsaw.3509.mRNA3509 4031 63
        AG1201_W01D2.3.T1 3644 370
        AG1201_RIT2P.1911.T1 2084 2194
        AG1201_RIT2P.1421.T1 4197 4307
        AG1201_RIT2P.1679.T1 4744 4809
        AG1201_W01D2.4.T1 5379 7480
        gW01D2.6.Ts1 8379 8597
        AG1201_W01D2.5.T1 12426 14053
        AG1201_W01D2.5.T2 13150 14053
        AG1201_W01D2.1.T3 14911 15468
        AG1201_W01D2.1.T1 14911 15489
        AG1201_W01D2.2.T6 16745 15638
        AG1201_W01D2.2.T7 16745 15638
        AG1201_W01D2.2.T8 16745 15638
        AG1201_W01D2.2.T1 17916 15638
        AG1201_W01D2.2.T4 17916 15638
        AG1201_W01D2.1.T4 16493 16612
      Transcript (16)
      PCR_product (21)
      Allele (510)
      Oligo_set: Aff_W01D2.2A 16388 15638
        Aff_W01D2.3 3539 2549
        Aff_W01D2.4 6380 7480
        Aff_W01D2.5 13291 14053
      Feature_object (447)
      Feature_data: W01D2:Polysome 1 26521
        W01D2:TranscriptionallyActiveRegion 1 26521
        W01D2:ChIPSeqTF 1 26521
        W01D2:TRF 1 26521
        W01D2:Dust 1 26521
        W01D2:inverted 1 26521
      Homol_data (19)
  Structure: From: Source: CHROMOSOME_II
    Overlap_right: R05H10 26416
    Overlap_left: Y54E2A
    Clone_left_end: W01D2 1
      R05H10 26416
    Clone_right_end: T16B3 26179
  DB_info: Database: EMBL NDB_AC Z83128
        NDB_SV Z83128.1
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Percy CM
    From_laboratory: HX
    Date_directory: 980812
    Species: Caenorhabditis elegans
    Strain: WBStrain00000001
  Visible: Clone: W01D2
  Properties: Genomic_canonical
    Checksum: MD5: 490dc629f32243fd06adcec912d0adf1
    Status: Finished: 12 Aug 1998 00:00:00
      Submitted: 27 Nov 1996 00:00:00
      Annotated: 01 Jan 1980 00:00:00
  Map: Sequence-II Ends: Left: 8482
        Right: 8494
  Interpolated_map_position: II 23.5303
  Assembly_tags: annotation 22962 22962 pointmutation of a g to a c in this clone
      1036 1036 point mutation
      1054 1054 point mutation
      1066 1067 point mutation
      2460 2460 deletion of an A in this clone
      14743 14743 point mutation
      14749 14749 point mutation
      22956 22956 pointmutation of a g to a c in this clone
      26118 26161 Deletion of 44bp in 5 clones
    Finished Left 1 4 W01D2
    Clone left end 1 4 W01D2
      26416 26421 R05H10
    Clone right end 26176 26179 T16B3
    Finished Right 26521 26521 W01D2
  Method: Genomic_canonical