WormBase Tree Display for Sequence: F53E10

F53E10 DNA: F53E10 26276
  SMap: S_child: Gene_child: WBGene00018762 10773 9863
        WBGene00018759 15609 15671
        WBGene00018761 6640 3730
        WBGene00018760 301 2772
        WBGene00268204 9669 9829
        WBGene00000056 16362 22972
        WBGene00018758 23020 26267
        WBGene00173048 16526 16546
      CDS_child: F53E10.1 23519 26175
        F53E10.2:wp125 16384 21870
        F53E10.2a:wp250 16384 21870
        F53E10.2b 16384 22907
        F53E10.2g 16384 22907
        F53E10.2h 21757 22907
        F53E10.2i 22782 22907
        F53E10.3:wp125 12240 15811
        F53E10.3:wp250 12551 15811
        F53E10.4a 304 2722
        F53E10.4b 424 2722
        F53E10.4c 1679 2722
        F53E10.5 6640 3730
        F53E10.5:wp230 6640 3730
        F53E10.6 10770 9953
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g70_x6_V_m 6316 6269
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25n11_x6_V_m 10165 9956
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g23_x6_V_p 304 2620
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g25n11e2k51_x6_V_m 10564 10264
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g12n11_x6_V_p 1679 2617
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g3n11_x6_V_m 10770 9956
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g7n11_x6_V_p 23519 26172
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g44_x6_V_p 21757 22811
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g80_x6_V_p 20604 20672
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g73_x6_V_p 17596 17655
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g92_x6_V_p 18936 19187
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g50_x6_V_p 19193 20585
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g4n11_x6_V_m 10770 9956
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g70_x6_V_p 21849 22873
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g2n11_x6_V_p 23519 26172
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g60_x6_V_p 17586 17654
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g59_x6_V_p 19061 19631
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g39_x6_V_p 304 2608
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g6n11_x6_V_p 23519 26172
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g46_x6_V_p 21757 22904
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g8n11_x6_V_m 10770 9956
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g62_x6_V_p 16553 17292
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g6_x6_V_p 304 2614
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g5n11_x6_V_m 10770 9956
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g36_x6_V_p 19626 20609
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g11n11_x6_V_p 23519 25887
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g29_x6_V_p 17428 17654
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g49_x6_V_p 21757 22904
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g39_x6_V_p 18936 19187
        RNASEQ_embryo_him-8_20dC_post-L1_g20_x6_V_p 304 2602
        RNASEQ_embryo_him-8_20dC_post-L1_g4n11_x6_V_p 23519 26172
        RNASEQ_embryo_him-8_20dC_post-L1_g3n11_x6_V_m 10770 9956
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g6_x6_V_p 304 2617
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g33_x6_V_m 10165 9956
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g55_x6_V_p 21849 22867
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g4n11_x6_V_p 23519 25887
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g10n11_x6_V_m 10770 10541
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g70_x6_V_p 21691 21756
        RNASEQ_L4_soma_JK1107_no_DNaseI_g5n11_x6_V_p 23519 25887
        RNASEQ_L4_soma_JK1107_no_DNaseI_g11n11_x6_V_p 1679 2620
        RNASEQ_L4_soma_JK1107_no_DNaseI_g7n11_x6_V_m 10770 9956
        RNASEQ_L4_soma_JK1107_no_DNaseI_g12_x6_V_p 304 1787
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g61_x6_V_m 4242 4141
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11_x6_V_p 21192 21275
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g26n11_x6_V_p 16384 21866
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g25n11_x6_V_p 21757 22904
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g2n11_x6_V_p 23519 26172
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g73_x6_V_m 4693 4581
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g49_x6_V_m 6440 5504
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11s8k189_x6_V_p 21168 21275
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g9n11_x6_V_m 10770 9956
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g11_x6_V_p 304 2617
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g46_x6_V_m 4022 3645
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g27n11e9k50_x6_V_p 21192 21323
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g8n11_x6_V_p 24963 25060
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g77_x6_V_m 6640 6572
        RNASEQ_early_embryo_g47_x6_V_m 5590 5540
        RNASEQ_early_embryo_g45_x6_V_p 17808 17858
        RNASEQ_early_embryo_g48_x6_V_m 6148 5997
        RNASEQ_early_embryo_g73_x6_V_p 22782 22874
        RNASEQ_early_embryo_g6n11_x6_V_p 23519 26172
        RNASEQ_early_embryo_g76_x6_V_p 1679 1771
        RNASEQ_early_embryo_g2n11_x6_V_m 10770 9956
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g34_x6_V_p 304 1943
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g7n11_x6_V_m 10770 9956
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g5n11_x6_V_p 23519 26172
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g36_x6_V_m 6440 6273
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g5n11s5k129_x6_V_p 25843 26172
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g39_x6_V_p 17428 20670
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g7n11_x6t1_V_m 10770 9956
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g46_x6_V_p 21757 21864
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g5n11_x6_V_p 23519 26172
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g6_x6_V_p 304 2719
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g5n11_x6_V_p 23519 25884
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g3n11_x6_V_m 10770 9956
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g25_x6_V_p 304 2605
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g49_x6_V_p 21757 22847
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g9n11_x6_V_p 23519 25887
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g25_x6_V_p 304 2611
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g12_x6t1_V_m 10165 9956
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g49_x6_V_p 1679 1771
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g44_x6_V_p 1920 2602
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g31_x6_V_p 23880 25881
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g3n11_x6_V_m 10770 9956
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g35_x6_V_p 304 1787
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g81_x6_V_p 22782 22895
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g1n11_x6_V_m 10770 9956
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g55_x6_V_p 16432 16552
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g82_x6_V_p 21691 21753
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g83_x6_V_p 17586 17654
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g85_x6_V_m 6326 6194
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g4n11_x6_V_p 23519 25884
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g88_x6_V_m 4242 4189
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g21n11_x6_V_p 1679 2614
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g18n11_x6_V_p 1679 2617
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g46_x6_V_m 6148 6042
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g6n11_x6_V_p 23519 25887
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g50_x6_V_m 6019 5902
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g47_x6_V_p 21856 22898
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g44_x6_V_m 3842 3765
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g65_x6_V_p 16511 17274
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g31_x6_V_p 304 2620
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g68_x6_V_p 17848 18945
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g4n11_x6_V_m 10770 9956
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g10_x6_V_p 304 2620
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g3n11_x6_V_p 1679 2617
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g60_x6_V_p 21856 22868
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g90_x6_V_p 20539 20586
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g2n11_x6_V_m 10770 9956
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g11n11_x6_V_p 23519 26172
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g4n11_x6_V_p 23519 26169
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g2n11_x6_V_m 10770 9956
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g16n11_x6_V_p 1679 2617
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g32_x6_V_p 304 2620
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g3n11_x6t1_V_m 10770 9956
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g58_x6_V_m 4354 4233
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g56_x6_V_p 21246 21714
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g15n11_x6_V_p 23519 25884
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g37_x6_V_p 424 2617
        F53E10.gc1 304 2722
        F53E10.gc2 6640 2807
        F53E10.gc3 10770 9953
        F53E10.gc4 16384 22907
        F53E10.gc5 23519 26175
        ContigV.elegans.jigsaw.594.mRNA594 16329 22961
        ContigV.elegans.jigsaw.592.mRNA592 6684 3430
        ContigV.elegans.jigsaw.595.mRNA595 23479 26267
        ContigV.elegans.jigsaw.591.mRNA591 205 3222
        ContigV.elegans.jigsaw.593.mRNA593 10844 9864
        AG1201_F53E10.4.T3 304 2722
        AG1201_F53E10.4.T2 424 2722
        AG1201_F53E10.4.T1 1679 2722
        AG1201_RIT5M.1669.T1 3169 2903
        AG1201_F53E10.5.T1 6640 3730
        AG1201_RIT5P.2245.T1 9671 9829
        AG1201_F53E10.6.T1 10770 9953
        AG1201_F53E10.3.T1w 12551 15811
        AG1201_F53E10.2.T4 16384 22907
        AG1201_F53E10.2.T5 16384 22907
        AG1201_F53E10.2.T3 21168 22907
        AG1201_F53E10.2.T2 21757 22907
        AG1201_F53E10.2.T1 22782 22907
        AG1201_F53E10.1.T2 23465 26175
        AG1201_F53E10.1.T3 23465 26175
        AG1201_F53E10.1.T1 23519 24043
      Transcript (17)
      Pseudogene: F53E10.3 15609 15671
        F53E10.8 9669 9829
      PCR_product (20)
      Allele (663)
      Oligo_set: Aff_F53E10.1 25118 26175
        Aff_F53E10.2 19053 21870
        Aff_F53E10.3 12240 15811
        Aff_F53E10.4 367 2722
        Aff_F53E10.5 5581 3730
        Aff_F53E10.6 10770 9953
      Feature_object (223)
      Feature_data: F53E10:Polysome 1 26276
        F53E10:TranscriptionallyActiveRegion 1 26276
        F53E10:ChIPSeqTF 1 26276
        F53E10:TRF 1 26276
        F53E10:Dust 1 26276
        F53E10:inverted 1 26276
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: W02H5 26077
    Overlap_left: C29G2
    Clone_left_end: F53E10 1
    Clone_right_end: C29G2 22613
  DB_info: Database: EMBL NDB_AC FO080714
        NDB_ID _U88177
        NDB_SV FO080714.1
    Secondary_accession: U88177
    DB_remark: The 5' clone is C29G2, 300 bp overlap; the 3' clone is W02H5, 200 bp overlap. Actual start of this clone is at base position 1 of F53E10; actual end is at 9426 of W02H5.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Beck C
      Wamsley P
    From_laboratory: RW
    Date: 29 Aug 1996 00:00:00
    Date_directory: 960826
    Species: Caenorhabditis elegans
  Visible: Clone: F53E10
  Properties: Genomic_canonical
    Checksum: MD5: 6bdf4badff8ba8674ac53c46f338efc7
    Status: Shotgun
      Finished
      Submitted: 29 Aug 1996 00:00:00
  Map: Sequence-V
  Interpolated_map_position: V -13.712
  Method: Genomic_canonical