WormBase Tree Display for Gene: WBGene00018760
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| WBGene00018760 | SMap | S_parent | Sequence | F53E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irg-3 | Person_evidence | WBPerson3965 | |||||
| Sequence_name | F53E10.4 | ||||||||
| Molecular_name | F53E10.4a | ||||||||
| F53E10.4a.1 | |||||||||
| CE10926 | |||||||||
| F53E10.4b | |||||||||
| CE51048 | |||||||||
| F53E10.4c | |||||||||
| CE51087 | |||||||||
| F53E10.4b.1 | |||||||||
| F53E10.4c.1 | |||||||||
| Other_name | nspg-2 | ||||||||
| CELE_F53E10.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | irg-3 | ||||||||
| DB_info | Database | AceView | gene | 5D73 | |||||
| WormQTL | gene | WBGene00018760 | |||||||
| WormFlux | gene | WBGene00018760 | |||||||
| NDB | locus_tag | CELE_F53E10.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018760|UniProtKB=P91316 | |||||||
| family | PTHR35014 | ||||||||
| NCBI | gene | 178726 | |||||||
| RefSeq | protein | NM_001316806.3 | |||||||
| NM_071310.6 | |||||||||
| NM_001316805.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0M7REP5 | |||||||
| A0A0M7RF66 | |||||||||
| P91316 | |||||||||
| UniProt_GCRP | UniProtAcc | P91316 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jul 2009 13:51:47 | WBPerson9133 | Name_change | CGC_name | irg-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irg | ||||||||
| Allele (85) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050596 | ||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00044287 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Involved in innate immune response. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53E10.4a | |||||||
| F53E10.4b | |||||||||
| F53E10.4c | |||||||||
| Corresponding_transcript | F53E10.4a.1 | ||||||||
| F53E10.4b.1 | |||||||||
| F53E10.4c.1 | |||||||||
| Other_sequence | CBC02990_1 | ||||||||
| CBC02990_2 | |||||||||
| CJC09776_1 | |||||||||
| Associated_feature | WBsf646709 | ||||||||
| WBsf646710 | |||||||||
| WBsf661161 | |||||||||
| WBsf999510 | |||||||||
| WBsf231521 | |||||||||
| WBsf231522 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032693 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048123 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015650 | ||||||||
| Expr1151932 | |||||||||
| Expr2012818 | |||||||||
| Expr2031057 | |||||||||
| Drives_construct | WBCnstr00026289 | ||||||||
| Construct_product | WBCnstr00026289 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (276) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Map | V | Position | -13.7976 | Error | 0.075917 | |||
| Positive | Positive_clone | F53E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028789 | ||||||||
| WBPaper00032331 | |||||||||
| WBPaper00035891 | |||||||||
| WBPaper00038845 | |||||||||
| WBPaper00047109 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
