WormBase Tree Display for Sequence: ZK1055

ZK1055 DNA: ZK1055 27645
  SMap: S_child: Gene_child: WBGene00022843 11032 14193
        WBGene00022847 23055 19638
        WBGene00022848 25824 23169
        WBGene00022845 2511 7895
        WBGene00022846 1292 4841
        WBGene00001829 14643 19657
      CDS_child: ZK1055.1 14675 19451
        ZK1055.2 11032 14083
        ZK1055.2:wp236 12958 14083
        ZK1055.3:wp156 11032 11491
        ZK1055.3:wp236 11032 11219
        ZK1055.4 6081 7820
        ZK1055.4:wp236 6048 7820
        ZK1055.5:wp261 1329 4839
        ZK1055.6a 22334 19704
        ZK1055.6b 23053 19704
        ZK1055.6c 23053 22229
        ZK1055.7 25822 23225
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g107_x14_V_m 22301 22060
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g78_x14_V_m 20150 19710
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g20_x14_V_p 17783 19448
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g90_x14_V_m 21996 21223
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g37n11_x14_V_m 25822 23228
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g8n11_x14_V_p 14675 17158
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g12_x13t1_V_m 14925 14235
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g66n11_x13_V_p 6923 6988
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g50n11_x13_V_p 15989 22359
        RNASEQ_Adult_spe-9_23dC_8days_post-L4_molt_g51n11_x13_V_p 227 15999
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g190_x14_V_p 13016 13134
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g96_x14_V_m 21906 19866
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g161_x14_V_p 13393 13553
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g180_x14_V_m 22292 22096
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g94n11_x14_V_p 14675 16138
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g123_x14_V_p 16211 16756
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g73_x14_V_p 18035 19448
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g49n11_x14_V_m 25822 23228
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g178_x14_V_p 3091 3235
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g149_x14_V_m 8041 7808
        RNASEQ_dauer_daf-2_25dC_91hrs_post-L1_g172_x14_V_m 8676 8573
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g112_x14_V_p 17783 19448
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g95_x14_V_m 21228 20064
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g145_x14_V_p 13649 13785
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g109n11_x14_V_p 14675 16180
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g167_x14_V_p 16211 16753
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g131_x14_V_p 13027 13169
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g51n11_x14_V_m 25822 23234
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g181_x14_V_p 13880 13966
        RNASEQ_dauer_entry_daf-2_25dC_48hrs_post-L1_g168_x14_V_m 21846 21601
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g57_x14_V_m 25107 23228
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g134_x14_V_p 19151 19316
        RNASEQ_dauer_exit_daf-2_25dC_91hrs_15dC_12hrs_post-L1_g95_x14_V_m 25553 25272
        RNASEQ_embryo_him-8_20dC_post-L1_g89_x14_V_m 24015 23357
        RNASEQ_embryo_him-8_20dC_post-L1_g23n11_x14_V_p 14675 17152
        RNASEQ_embryo_him-8_20dC_post-L1_g24_x14_V_p 17783 19448
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g25n11_x14_V_p 14675 17158
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g149_x14_V_p 6488 6826
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g106_x14_V_p 4157 4752
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g41n11_x14_V_m 23053 19707
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g38_x14_V_p 17783 19448
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g24n11_x14_V_m 25822 23228
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g185_x14_V_p 1333 2893
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g79_x14_V_m 9311 9287
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g193_x14_V_p 11996 12151
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g189_x14_V_p 12551 12941
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g95_x14_V_m 5035 4581
        RNASEQ_male_mid-L4_25dC_30hrs_post-L1_g123_x14_V_m 3620 3549
        RNASEQ_L4_soma_JK1107_no_DNaseI_g178_x14_V_p 6833 7541
        RNASEQ_L4_soma_JK1107_no_DNaseI_g128_x14_V_p 6464 6639
        RNASEQ_L4_soma_JK1107_no_DNaseI_g32n11_x14_V_m 25822 23228
        RNASEQ_L4_soma_JK1107_no_DNaseI_g76_x14_V_m 21906 19899
        RNASEQ_L4_soma_JK1107_no_DNaseI_g171_x14_V_p 14879 15444
        RNASEQ_L4_soma_JK1107_no_DNaseI_g115_x14_V_p 6129 6272
        RNASEQ_L4_soma_JK1107_no_DNaseI_g212_x14_V_p 6640 6787
        RNASEQ_L4_soma_JK1107_no_DNaseI_g108_x14_V_p 18035 19448
        RNASEQ_L4_soma_JK1107_no_DNaseI_g150_x14_V_p 16247 16357
        RNASEQ_L4_soma_JK1107_no_DNaseI_g156_x14_V_m 22244 22054
        RNASEQ_L4_soma_JK1107_no_DNaseI_g172_x14_V_p 15980 16207
        RNASEQ_L4_soma_JK1107_no_DNaseI_g56n11_x14_V_p 14655 14819
        RNASEQ_L4_soma_JK1107_no_DNaseI_g74_x14_V_m 211 181
        RNASEQ_L4_soma_JK1107_no_DNaseI_g85_x14_V_m 4436 3726
        RNASEQ_L4_soma_JK1107_no_DNaseI_g92_x14_V_m 5065 4467
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g61_x14_V_p 17783 19448
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g54n11_x14_V_p 14675 17149
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g166_x14_V_p 13649 13743
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g36n11_x14_V_m 23053 19707
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g25n11_x14_V_m 25822 23228
        RNASEQ_lin-35_n745_mid-L1_25dC_4.0hrs_post-L1_g171_x14_V_p 3451 3841
        RNASEQ_early_embryo_g84n11_x14_V_m 25822 23228
        RNASEQ_early_embryo_g97_x14_V_m 21906 21547
        RNASEQ_early_embryo_g16_x14_V_p 17783 19448
        RNASEQ_early_embryo_g119_x14_V_p 4157 4767
        RNASEQ_early_embryo_g112_x14_V_m 21489 19851
        RNASEQ_early_embryo_g18n11_x14_V_p 14675 17161
        RNASEQ_early_embryo_g81_x14_V_p 6833 7790
        RNASEQ_early_embryo_g125_x14_V_p 13018 13065
        RNASEQ_early_embryo_g78_x14_V_m 247 187
        RNASEQ_early_embryo_g85s8k172_x14_V_m 3763 3546
        RNASEQ_early_embryo_g64e8k77_x14_V_m 8445 8273
        RNASEQ_early_embryo_g64_x14_V_m 9451 7777
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g28_x14_V_p 17783 19448
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g110_x14_V_m 21996 19707
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g100_x14_V_p 6833 7805
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g111_x14_V_p 3346 4797
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g37n11_x14_V_p 14675 17161
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g81n11_x14_V_m 25822 23231
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g171_x14_V_p 1392 2997
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g79_x14_V_m 9602 7777
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g79m8_x14_V_m 8445 8273
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g84s8k172_x14_V_m 3763 3546
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g71_x14_V_m 5201 3973
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g95_x14_V_m 9347 9287
        RNASEQ_late_embryo_20dC_4.5hrs_post-early_embryo_g71m7_x14_V_m 4358 4235
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g112_x14_V_m 22334 19707
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g70_x14_V_p 14879 19448
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g34n11_x14_V_m 25822 23228
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g65_x14_V_m 247 187
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g63s8k112_x14_V_m 8097 8041
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g78m7_x14_V_m 5346 4235
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g83_x14_V_m 5201 3726
        RNASEQ_mid-L1_20dC_4hrs_post-L1_g102_x14_V_m 9602 7777
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g102_x14_V_p 14879 17158
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g86n11_x14_V_p 18526 19448
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g88_x14_V_p 17783 18558
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g105_x14_V_p 6833 7817
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g34n11_x14_V_m 25822 23228
        RNASEQ_mid-L2_25dC_14hrs_post-L1_g104_x14_V_m 21996 19707
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g45n11_x14_V_p 14675 17152
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g135_x14_V_p 13278 13331
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g48n11s1k54_x14_V_m 22334 19707
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g78_x14_V_p 17783 19448
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g13n11_x14_V_m 25822 23228
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g155_x14_V_p 6222 6290
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g48n11e4k64_x14_V_m 23053 20944
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g95_x14_V_m 247 181
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g92_x14_V_m 8691 8549
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g82_x14_V_m 5346 5193
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g77_x14_V_m 9451 9068
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g99_x14_V_m 8353 7822
        RNASEQ_mid-L3_25dC_25hrs_post-L1_g187_x14_V_m 9595 9548
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g153_x14_V_p 6954 7404
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g64n11_x14_V_m 23053 19707
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g22n11_x14_V_m 25822 23228
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g104_x14_V_p 6401 6808
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g70_x14_V_p 17783 19448
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g61_x14_V_p 14879 17158
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g98_x14_V_m 247 181
        RNASEQ_mid-L4_25dC_36hrs_post-L1_g89_x14_V_m 8691 7831
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g253_x14_V_m 21996 21925
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g7n11_x14_V_p 14675 17158
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g131_x14_V_m 21906 21508
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g37_x14_V_p 17783 19448
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g46n11_x14_V_m 25822 23228
        RNASEQ_Adult_Harposporium_exposed_2_24hrs_g99_x14_V_m 20150 19926
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g7n11_x14_V_p 14675 17158
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g92_x14_V_m 20150 19857
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g95_x14_V_m 21906 21538
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g53n11_x14_V_m 25822 23270
        RNASEQ_Adult_Harposporium_control_EcoliOP50_exposed_2_24hrs_g26_x14_V_p 17783 19448
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g18n11_x14_V_p 14675 17152
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g75_x14_V_m 20150 19707
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g165_x14_V_p 6147 6287
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g51n11_x14_V_m 23053 21211
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g43_x14_V_p 17783 19448
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g73n11_x14_V_m 21996 21782
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g31n11s4k56_x14_V_m 24495 23965
        RNASEQ_Adult_S_macescens_Db10_exposed_1_24hrs_g31n11_x14_V_m 25822 23228
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g41n11_x14_V_m 25822 23228
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g53_x14_V_p 17783 19448
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g21n11_x14_V_p 14675 17158
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g40n11_x14_V_m 23053 19707
        RNASEQ_Adult_S_macescens_Db10_control_EcoliOP50_exposed_1_24hrs_g14_x13_V_m 14925 14235
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g102_x14_V_p 11289 11336
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g36_x14_V_p 17783 19448
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g46n11_x14_V_m 25822 23228
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g64n11_x14_V_m 23053 21514
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g168_x14_V_p 6440 6529
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g88_x14_V_m 21489 19977
        RNASEQ_Young_Adult_25dC_46hrs_post-L1_g16n11_x14_V_p 14675 17161
        EGAP9.gc4 1329 4011
        ZK1055.gc1 1329 4339
        ZK1055.gc2 6081 7820
        ZK1055.gc3 10631 11491
        ZK1055.gc4 12958 14515
        ZK1055.gc5 14675 19451
        ZK1055.gc6 23053 19704
        ZK1055.gc7 25822 23225
        ContigV.elegans.jigsaw.1569.mRNA1569 23089 19514
        ContigV.elegans.jigsaw.1565.mRNA1565 3310 4919
        ContigV.elegans.jigsaw.1566.mRNA1566 5980 7896
        ContigV.elegans.jigsaw.1568.mRNA1568 14640 19628
        ContigV.elegans.jigsaw.1567.mRNA1567 11032 14269
        ContigV.elegans.jigsaw.1570.mRNA1570 25929 23177
        AG1201_ZK1055.5.T4 1329 3301
        AG1201_ZK1055.5.T2 3346 4839
        AG1201_ZK1055.5.T1 3451 4839
        AG1201_ZK1055.4.T3 6048 6586
        AG1201_ZK1055.4.T4 6048 7820
        AG1201_ZK1055.4.T2 6081 7820
        AG1201_ZK1055.4.T1 6833 7820
        AG1201_ZK1055.3.T1 11032 11288
        AG1201_ZK1055.3.T4 11032 11291
        AG1201_ZK1055.3.T3 11032 13066
        AG1201_ZK1055.3.T2 11032 14083
        AG1201_ZK1055.3.T6 13278 14083
        AG1201_ZK1055.1.T1 14675 19451
        AG1201_ZK1055.6.T8 21996 19704
        AG1201_ZK1055.6.T10 23053 19704
        AG1201_ZK1055.6.T6 23053 20941
        AG1201_ZK1055.6.T3 21996 21883
        AG1201_ZK1055.6.T2 22334 21883
        AG1201_ZK1055.6.T5 23053 21883
        AG1201_ZK1055.6.T1 23053 22428
        AG1201_ZK1055.7.T1 25822 23225
        AG1201_ZK1055.7.T2 25822 23225
      Transcript: ZK1055.1.1 14643 19657
        ZK1055.2.1 11032 14193
        ZK1055.4.1 2511 7895
        ZK1055.4.2 4210 7870
        ZK1055.6a.1 23055 19638
        ZK1055.6a.2 23055 19646
        ZK1055.6b.1 23053 19639
        ZK1055.6c.1 23053 22229
        ZK1055.7.1 25824 23169
      Pseudogene: ZK1055.5 1292 4841
      PCR_product (26)
      Allele (293)
      Feature_object (197)
      Feature_data: ZK1055:Polysome 1 27645
        ZK1055:TranscriptionallyActiveRegion 1 27645
        ZK1055:ChIPSeqTF 1 27645
        ZK1055:TRF 1 27645
        ZK1055:Dust 1 27645
        ZK1055:inverted 1 27645
      Homol_data: ZK1055:RNAi 1 27645
        ZK1055:SAGE 1 27645
        ZK1055:Mass-spec 1 27645
        ZK1055:TEC_RED 1 27645
        ZK1055:wublastx_brenneri 1 27645
        ZK1055:wublastx_briggsae 1 27645
        ZK1055:wublastx_brugia 1 27645
        ZK1055:wublastx_fly 1 27645
        ZK1055:wublastx_human 1 27645
        ZK1055:wublastx_japonica 1 27645
        ZK1055:wublastx_ovolvulus 1 27645
        ZK1055:wublastx_pristionchus 1 27645
        ZK1055:wublastx_remanei 1 27645
        ZK1055:wublastx_sratti 1 27645
        ZK1055:wublastx_worm 1 27645
        ZK1055:RepeatMasker 1 27645
  Structure: From: Source: CHROMOSOME_V
    Overlap_right: F44C4 27146
    Overlap_left: EGAP9
    Clone_left_end: ZK1055 4148
      F44C4 27446
    Clone_right_end: EGAP9 4151
      Y40G12A 7760
  DB_info: Database: EMBL NDB_AC FO081055
        NDB_ID _AF068721
        NDB_SV FO081055.1
    Secondary_accession: AF068721
    DB_remark: The 5' clone is EGAP9, 4151 bp overlap; the 3' clone is F44C4, 500 bp overlap. Actual start of this clone is at base position 4148 of ZK1055; actual end is at 19252 of F44C4.
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Geisel C
      Bradshaw H
    From_laboratory: RW
    Date: 16 Aug 1996 00:00:00
    Date_directory: 960815
    Species: Caenorhabditis elegans
  Visible: Clone: ZK1055
  Properties: Genomic_canonical
    Checksum: MD5: f737870cb8ef93a448f0733812b32bb2
    Status: Shotgun
      Finished
      Submitted: 16 Aug 1996 00:00:00
  Map: Sequence-V
  Interpolated_map_position: V 0.108861
  Method: Genomic_canonical