WormBase Tree Display for Sequence: C02C2

C02C2 DNA: C02C2 20493
  SMap: S_child: Gene_child (4)
      CDS_child (168)
      Transcript: C02C2.1.1 11533 14946
        C02C2.3.1 4241 6489
        C02C2.4.1 3040 332
        C02C2.5.1 16654 14928
      Nongenomic: yk347c11 13542 14793
      PCR_product (19)
      Allele: WBVar00402348 16770 16770
        WBVar02034232 5427 5428
        WBVar00841461 3838 3838
        WBVar01397040 6963 6963
        WBVar00402349 17557 17557
        WBVar00841462 3985 3985
        WBVar01397041 18112 18112
        WBVar00841463 4086 4086
        WBVar00402350 18438 18438
        WBVar00841464 4192 4192
        WBVar01566919 3462 3462
        WBVar00841465 4366 4366
        WBVar00841466 4366 4366
        WBVar01566920 9184 9184
        WBVar01566921 10030 10030
        WBVar00841467 5134 5134
        WBVar00841468 5157 5157
        WBVar02148234 4597 4673
        WBVar00841469 5246 5246
        WBVar00841470 5660 5660
        WBVar00841471 5710 5710
        WBVar00841472 5780 5780
        WBVar00841473 6089 6089
        WBVar00841474 6355 6355
        WBVar00841475 6781 6781
        WBVar00841476 6835 6835
        WBVar00841477 6939 6939
        WBVar00841478 7019 7019
        WBVar00841479 7849 7849
        WBVar00841480 7954 7954
        WBVar00841481 8581 8581
        WBVar00841482 9549 9549
        WBVar02141101 13038 13731
        WBVar00841483 9788 9788
        WBVar00841484 9869 9869
        WBVar00841485 9912 9912
        WBVar00841486 10014 10014
        WBVar00841487 10113 10113
        WBVar02018973 3994 3995
        WBVar00841488 10136 10136
        WBVar00841489 10160 10160
        WBVar00841490 10273 10273
        WBVar00841491 10597 10597
        WBVar02053415 3923 3924
        WBVar00841492 10666 10666
        WBVar00269877 5368 5368
        WBVar00841493 10706 10706
        WBVar01331252 6779 6779
        WBVar01331254 8840 8840
        WBVar00841494 11056 11056
        WBVar00841495 11077 11077
        WBVar00841496 11636 11636
        WBVar00841497 11658 11658
        WBVar02151459 12947 13037
        WBVar01645559 1388 1388
        WBVar00841498 11888 11888
        WBVar01983960 9328 9328
        WBVar00841499 11919 11919
        WBVar01983961 10644 10644
        WBVar01645560 1400 1400
        WBVar00233796 18111 18112
        WBVar01645561 4981 4981
        WBVar00841500 11922 11922
        WBVar01983962 13033 13033
        WBVar00841501 12132 12132
        WBVar01645562 5024 5024
        WBVar02073258 5427 5428
        WBVar00841502 12176 12176
        WBVar01645563 5149 5149
        WBVar00260610 777 778
        WBVar01645564 7611 7611
        WBVar01541852 18113 18113
        WBVar00841503 12633 12633
        WBVar02073259 10227 10228
        WBVar00841504 12795 12795
        WBVar01645565 10232 10232
        WBVar01541853 18114 18114
        WBVar00841505 13120 13120
        WBVar01408926 16786 16787
        WBVar01645567 13083 13083
        WBVar01722954 349 349
        WBVar00841506 13199 13199
        WBVar01645568 15592 15592
        WBVar00841507 13221 13221
        WBVar01645569 17344 17344
        WBVar01722955 2261 2261
        WBVar01722956 10173 10173
        WBVar00841508 13595 13595
        WBVar00841509 13756 13756
        WBVar01722957 16740 16740
        WBVar00841510 14443 14443
        WBVar00841511 14673 14673
        WBVar00841512 14847 14847
        WBVar02049711 18084 18085
        WBVar00841513 15043 15043
        WBVar01838156 7071 7071
        WBVar00299813 1998 1998
        WBVar00841514 15045 15045
        WBVar00841515 15130 15130
        WBVar01838157 8199 8199
        WBVar00299814 1999 1999
        WBVar01657077 9101 9101
        WBVar00841516 15188 15188
        WBVar00299816 3306 3306
        WBVar00841517 15247 15247
        WBVar00841518 15337 15337
        WBVar00841519 15776 15776
        WBVar00841520 16019 16019
        WBVar00841521 16057 16057
        WBVar00841522 16102 16102
        WBVar00841523 16595 16595
        WBVar00841524 16791 16791
        WBVar00242928 10391 10391
        WBVar00242929 10392 10392
        WBVar00841525 17063 17063
        WBVar00841526 17299 17299
        WBVar00841527 17523 17523
        WBVar00841528 18002 18002
        WBVar01628855 3229 3229
        WBVar00841529 18073 18073
        WBVar00841530 18082 18082
        WBVar01903894 6527 6527
        WBVar00841531 18236 18236
        WBVar00258432 14693 14694
        WBVar00841532 18580 18580
        WBVar00841533 18754 18754
        WBVar00841534 18787 18787
        WBVar00099754 6132 6132
        WBVar00099755 6133 6133
        WBVar01490772 403 403
        WBVar02132317 12685 12685
        WBVar00066858 1084 1084
        WBVar01496485 11820 13903
        WBVar00066873 1762 1762
        WBVar00066878 2355 2355
        WBVar00249810 3976 4497
        WBVar00306609 3306 3306
        WBVar01446911 2733 2733
        WBVar00066888 8635 8635
        WBVar01446912 4446 4446
        WBVar01446913 10619 10619
        WBVar02125608 15558 16254
        WBVar00066893 9755 9755
        WBVar00061714 1408 1408
        WBVar00066898 10383 10383
        WBVar00061719 1483 1483
        WBVar01265937 7424 7424
        WBVar00061724 7541 7541
        WBVar00061729 11036 11036
        WBVar01265942 11203 11203
        WBVar00061734 11589 11589
        WBVar00066908 15102 15102
        WBVar00092115 4865 5971
        WBVar00275698 12396 12396
        WBVar00275699 15427 15427
        WBVar00298450 3306 3306
        WBVar01952392 10643 10644
        WBVar00066918 16245 16245
        WBVar00061749 16113 16113
        WBVar00061754 16664 16664
        WBVar00061759 16714 16714
        WBVar00061764 17986 17986
        WBVar02010623 8060 8061
        WBVar00066933 18663 18663
        WBVar01479980 4438 4438
        WBVar01479981 6834 6834
        WBVar00402320 2035 2035
        WBVar00402321 2386 2386
        WBVar00402322 3247 3247
        WBVar00402323 3460 3460
        WBVar00402324 3558 3558
        WBVar00402325 4426 4426
        WBVar00402326 4929 4929
        WBVar00402327 5372 5372
        WBVar00402328 5481 5481
        WBVar02003359 5427 5428
        WBVar00402329 5495 5495
        WBVar00402330 5513 5513
        WBVar00402331 6406 6406
        WBVar00841444 716 716
        WBVar00841445 930 930
        WBVar00402332 7159 7159
        WBVar00841446 1024 1024
        WBVar00402333 7477 7477
        WBVar00841447 1338 1338
        WBVar00402334 9559 9559
        WBVar00402335 10983 10983
        WBVar00841448 1371 1371
        WBVar00841449 1438 1438
        WBVar00402336 10984 10984
        WBVar00841450 1865 1865
        WBVar00402337 11289 11289
        WBVar01939262 18112 18113
        WBVar00402338 11485 11485
        WBVar00841451 1994 1994
        WBVar00841452 2086 2086
        WBVar00402339 12015 12015
        WBVar00841453 2229 2229
        WBVar00402340 12494 12494
        WBVar00402341 12850 12850
        WBVar00841454 3306 3306
        WBVar00841455 3313 3313
        WBVar00402342 13747 13747
        WBVar00841456 3501 3501
        WBVar00402343 14868 14868
        WBVar00841457 3534 3534
        WBVar00402344 15439 15439
        WBVar00402345 15689 15689
        WBVar00841458 3576 3576
        WBVar00841459 3626 3626
        WBVar00402346 16442 16442
        WBVar00402347 16740 16740
        WBVar00841460 3785 3785
      Oligo_set: Aff_C02C2.1 13626 14616
        Aff_C02C2.3 5346 6314
        Aff_C02C2.5 15953 14973
        Aff_C02C2.6 20426 19196
      Feature_object (153)
      Feature_data: C02C2:Polysome 1 20493
        C02C2:TranscriptionallyActiveRegion 1 20493
        C02C2:ChIPSeqTF 1 20493
        C02C2:TRF 1 20493
        C02C2:Dust 1 20493
        C02C2:inverted 1 20493
      Homol_data (20)
  Structure: From: Source: CHROMOSOME_III
    Overlap_right: ZK688 18895
    Overlap_left: ZK652
  DB_info: Database: EMBL NDB_AC FO080276
        NDB_ID _L23649
        NDB_SV FO080276.2
    Secondary_accession: L23649
    DB_remark: The 5' clone is ZK652, 2000 bp overlap; the 3' clone is ZK688, 1600 bp overlap. Actual start of this clone is at base position 24249 of ZK652; actual end is at 11020 of ZK688.
      [121025] Sequence correction WBsf268387 : Deletion C-1 bases @ 2000
      [121025] Sequence correction WBsf268200 : Deletion C-1 bases @ 12396
    Keyword: HTG
    EMBL_dump_info: EMBL_dump_method: worm_EMBL-dump
  Origin: From_author: Wilson R
      Wilson RK
    From_laboratory: RW
    Date: 14 Aug 1992 00:00:00
      01 Sep 1993 00:00:00
      19 Feb 1996 00:00:00
    Date_directory: 960117
    Species: Caenorhabditis elegans
  Visible: Clone: C02C2
    Reference: WBPaper00015076
      WBPaper00022235
    Remark: [20100427 wnash] deleted -1 bp at position 19896 (between ctacttttcg and ggatcgaaaa)
  Properties: Genomic_canonical
    Checksum: MD5: 1042cf1046b4edfef3220534fe408f16
    Status: Finished
      Submitted: 14 Aug 1992 00:00:00
  Map: Sequence-III
  Interpolated_map_position: III -0.52366
  Method: Genomic_canonical