WormBase Tree Display for RNAi: WBRNAi00099035
expand all nodes | collapse all nodes | view schema
| WBRNAi00099035 | Homol | Homol_homol | K04G2:RNAi | ||
|---|---|---|---|---|---|
| Sequence_info | DNA_text | ATGAGCTCTAGTAGTAGTGATGAAAATGAAACAACGATACACAGAACAGGATCAAATACCGGTGGAAGTGGAATCTACTCACAACCTCGAGCAGGATCATCAAAAAGAACATCGAATGTGCGACATGATGTTAGTGATGTAGATGATGAAGAAGAGCATTATGCAAGATTTCGCGAAGATACGGCGATCGAGGTTGACGATGCTATAACAGTTCTTCTTTCATCTCTACATTTCGAACACAAACGTGATATTGTTCCGACCGATGAAGATGATAATAAACTTCGAGAACTTCACGAAAAGATTTTTGCATTGATAACGAGTGAATCTGATGTTAACAGAAAAAGACGGCTGAAAAAAGCTCTTCCTGCGTCAAACTGTGTTAGAGAACAAGTATATTATCTTCGAAGGAAACCATCAACACCACCAGCTTCTTATTATCATCGACTAAATGCAGCTCTTCACACAATCGTTAAGGAATCATTTGGAGAAGAATATCGAAAAGTTGCTACAGTATTAGGACTTGTTGAAGCGCTTGCAGAAGTTTTAATTCTTGAAGTTCACACATTTGGAATCAATGAGACCAATCCTGGAGAGCATCGAAATATTCGAAAACTTATTGCCAATGCTCTTACGAATTTAACATACGGTCAAATTCACTCTAAACGCCGGCTATGCTCATATGATGGATTCATTCGATGCGTTGTTCGAATTGTGATCGAATCTCCAAATATAACTCAAGTATACGCTGGACTAATCAGAAATCTCTCATGGAACGCCGATTCAGGAATGAGTGAAGCTCTTCAACCAACAGTTCATGCACTTTCAATTGCTGCAGTACATGCACATACACATAGATTCGATGTTACAGCAACATTATCTGCTTTGTGGAATCTTGCTGGTCACTCAGTAGAGAATAAACGAACTATTTGTGATACTCCGAATTGTTTAAAAGTATTAGCCAGCCTTCTATCTCCTGATGCAAGATTCACGTCACTTGTTGATTCAGCTACTGGAATTCTGAAGTATGTATCACAATATCTCGCGAATACTTCCACGCATTTAGAGCTAAGAAGCTTGCTCATCACTCGAATGCTCACTTTGCTCAAGAGTGCCTCGTTCACTTGTGTTACAAATACTCTAGGAGCTATTGCAAACCTAATTGTCAAAGATCCCCACATGCAGCAAATGATTCGGCAGGATATGGCTGCAGTACAGCAACTCAACGTACTCCGAAACTCGAATCGTGATGATATTCGGACAGCAGTGAAGTCTGTGCTGAATACTCTTAATCAACCGTGTAGTCATCGTTATGGTGATATGTCACATTCTGTTGGAGGAGGAGCCACAGGGATGCAAATGCTTTCGGAGCCACAACTTCAGATGCAAACATCTCATCATGCTTATCATGGAACTGCGTCACCAAGATTACTATCACTGAGAGCAACTCGAGCATCACCTGGAAAATATATACAACCACAGGCTCAACAACAGTTGATACAGACTCCACAAGTTGATCAAAGATCTAGTAGTCTGCCAAGACATTTTGCCGTTCAACGAAATGGATTTGTGATGGCACAGTCCTACAATCAACAAATGGATCAACATCAGCAACAACAAATGATCTATCAATTGCAGCAACAACAACAAATTATGTTTCAGACGGAGGATCAAGCGCAAATGGAACATCATCAACAAATCATGTACCTTCAGCAGCAACAACAACAATTTCATCAAATTCAACAACAGCAACAAATGCAAAAAGCTCAGGAAGCTGATCCAGTTCCTCCTACGGATGACGATCTAGATATTCCCACATCTACCGTAATGGGAACACGAAGTAACAGTGAAAGAAGTCTCGGCTCGATGAATCCTGGAAGTGTTATGACAAACTGGAATTCTTCTCTGGATACTGCAGCCAACAGTTCTCGTGCTCTTTCTCCTGTATCATACAATGATATTCCAGCTTCTCCAACAATGTGTGCTCAGGTGTTCAATTTACCTAAATCCACTGAATCGGAACATCATCAATTGACGTCTCAACAGCAGAACACTACACATTATAGCAGTGGATCAGCTAACACTATGACTCGGAGTGATGGTGCAACTACTGTGCCAATGGATAACATTATTACACCAACTTATGCTATTTTGAATCCAATATTGGTACACGAACAGACACCGAACGGGACAGTTCCACGAAAGACTTCAGAAGAGTTGGATAGTCCTGATGATGTTCTCCCAGGTCCATCTCTTGAGGAGGAAGAAGGTGATTATGCTATAATAGGAGGTGCCGCACAAAAGACAGATGACGAGCTTTTGACTCGTTCTATTCAATCTGAAATGCCTACTTCGTCGTCTACTCCGAAGATGAAAGTCTCGCCTCGCCTTAATGGATTCTTCTCTCCAACTCAGAAAACAACATCGTCTCCTGCATGGTCTCATCCAGATACCTCACCGATTCCAAAGTCATCTTCTCATCGAACTCAACCTAATCGTCGTCAAGATGCTTCTGATGCAGATCGTCTTTTAATGGAATCAATAATGTCAGAGATGCCAAAAAGTCGAATTATATCTCCACGACTTGCTGGTACACAACAATATCTTGAACCCGAGCCAGAGAGAAGAAGTCATTCAAAAAACGAGGAAGCCGATCGCCGCGACGCATTCACCGCATCGCATGAGCCCAGCGATCATAACGGCATTGATGTGGCAAGAGGCTCAGACTGGTCTCCACAACAACAATTACATCGAATGGAGTCATTGGAAAGCCAAGCTAGTAGTGAAGATAGTTTTGGATTAACTGCTGAAGAACCAAATTCATCAACTTCTGGTGCTGCTGCAAACACTATGAGATTTGACGATGAGATCGATGCATCTCTTCCAATGGATTGTGTCGATGATGATGATTACGACTATACTTATGATCATTTCGAAGATTATGAAGATGAGGAGGATCCTGATGCGACTCAGTTTGATGATGGAGTTGATGCACAACTAACTATCGATTGTTCAATGATTTCTAGTGGAAGCGGTTCATCGCAAAGAAATGAAACTACGACAACGTCACGAGATTCAAAAGCTTTAGCTACTTCCACACCAAAAGGATCTGCATCTTCACTCCCAGGAGTTCGACAAGCCACCCGAGTATCAACGAATGGAAAGTCAAGACTGCCTGTTCCAAAAACGAATGGATCACTTGTTGATAAGAATCCCAAGCCAATCATCGCTTCCCGGCGGCCACGATTGCCACCGAAGCCGACACTTTTAAAAGATAAGCACTATCCAGAAGAGGATTCGATTGAGAATCAGACGAGAGATGATACGATATATGTGAATGCTCCAGTTGTTGAGGCAGAACAAGAACGAATTTATATGAATGCATTGAAGCAACAGAAGAACATTGAGCAATCACCGTCAATTGGAAACGGATCACCTATAGCTAAATCTGCAATTGTAACGCCCTACAATTATCAGAAACCGCCTTTCACTGGTCGAAATAATGGTGAAATGAGCAACGAGAAGAGTGTGACACCGAATCCTAAACAAATGCTTGTAACAATAGTCTAA | |||
| Experiment | Laboratory | JR | |||
| Date | 30 Jul 2010 00:00:00 | ||||
| Genotype | hmp-2(zu364) | ||||
| Inhibits | Predicted_gene | K04G2.8c | Inferred_automatically | RNAi_primary | |
| K04G2.8b | Inferred_automatically | RNAi_primary | |||
| K04G2.8a | Inferred_automatically | RNAi_primary | |||
| Gene | WBGene00000156 | Inferred_automatically | RNAi_primary | ||
| Transcript | K04G2.8c.1 | Inferred_automatically | RNAi_primary | ||
| K04G2.8b.1 | Inferred_automatically | RNAi_primary | |||
| K04G2.8a.1 | Inferred_automatically | RNAi_primary | |||
| Species | Caenorhabditis elegans | ||||
| Interaction | WBInteraction000521881 | ||||
| Reference | WBPaper00037107 | ||||
| Phenotype | WBPhenotype:0000708 | Remark | RNAi depletion of APR-1 in a hmp-2(zu364) mutant resulted in a marked decrease in the frequency of embryos with differentiated gut, hence hmp-2(zu364) enhances the apr-1 RNAi defect. | ||
| Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. Method of delivery not explicit, authors say injection or soaking. | ||||
| Method | RNAi |
