WormBase Tree Display for RNAi: WBRNAi00084010
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| WBRNAi00084010 | Homol | Homol_homol | C17C3:RNAi | |||
|---|---|---|---|---|---|---|
| F31A3:RNAi | ||||||
| Sequence_info | DNA_text | atgtcttcctctccaacttcgtcatcatctgggtccccttcttcacatggacatcgatctgaaacagaaaaacaaagaagagatgatactaatgatctgttgaatgaattcaagaaaatcgttcaaaaatcggaatctgaaaaactttcaaaagaagaggttctatttcgtattgtgaaattgttatctggtattcaacttcatcacgaatcgttttcaacatcgcctggaccaattagaagtattaaaaagattaaaagcgatcgggaacaagttcgccgaaataagagagttgccgcgtacagagagctcagaaaatttattgcattgaataatttgagtagctcagaagaaatagacaaaatggagaatttgaaggttctagaaatcatctttgaagtgattcgtggaaagtcgatcacatgtacagtaccttgcctaccatttccaatacttccttttctcccagtattcccagtttattcgccattagttttcaattcatacaatcaattttcactttatcctcctcacatgcctacagttcagattcctattgtcccaagttccagcttcgaaattgacgctctggaaatagaagaaaatgagaaagatatcgatattgttggctga | ||||
| atggaccgcagaaagcttcaaaaagaggcaagaagtgaaatgaaaaagaccgccaatggcgtcgaccgtgccacatataaccgagcaaaggctcttttggagataatccggaaggaagagattgccacaaatgatctggcttcctccacgatctccaagatgccaaaagttatcccatcttcaatgagcgattatcgttccgtcccatacaatcaaactccaaaatcaggatctgaacggaaaagaagaaatattacaaacgagttgattaacgaatgcaagacgattgttcaaaaatcagaagaagaacatatatcacaagaagtagttctcttccgaattgtgaaacttgtgactggagttaatctggaatctaatttctcatcgaatgacctctccgaatctacaagacggaagtttgatactgaatccgaaagaagaaaagtgaagactgaacgtgaaaagattcgaagaaagaaacaagatgactgttatgctgaattgaaattcttcattttgaacaaacaaatgggaagttacgagcaacgattaaaacttgaacggatcacaattctagaaatcatcattgattacattaaacacaattccgatcttctgtatccagaaacaattccccaaatacttcctcttttagctggaaaatcaactgctacttgtgagaacaaagagaatgaaaagccaaaaacacgaatggaagtgaaggatctcttcccaagattgacgtttcaagaagttcaagaatccccaacatctacttctccattgctcacatttccatgtattccaatgatcccaactactcagttcaatgtcttgtcaaactacaacaccgttccatcaatattttctgctcccctccgattcattcttccatcacttcaaatcttaacaccagaaactagtgacgaggaagaaaatgaagaaaccgtcgatattagtaactag | ||||||
| atgccaaaagtacatcaagcaacatttccaaaagccagtgtccattcagttccatacaaccaaactcgaaaatcagtttccgaacggaaaagaagagatgaaatcaatgaattactggaaaatctcaaaacaattgtgcaaaatccttctgacagcaatgagaagatttcacacgaaactattctattccgtgtgtttgaacgggtttctggagttgatttggaaacaaaattcaactcaaccgttgatatccctaaagctgagggaaatacaaaagaggagaagcagaaagtgaagacaaaaagagaacaaatcagaagaagtaagcaagatatctgttacaccgaacttggaaatttcgttcacaaaaaccgacttggcaatactgagcaaaggaacaaattggaacgcgtaacagttttgcaaataattctcgaatacatctgtcaaatgccagaacaatcagaagcaatagaaaaggaaaactcaccgatgtaccaagtgtatctagaaccaactaaatgtatttctccagaacaatccgtcgcttctcccagccctttccttctttcaaacacgttggcattcttcaatcaggttgcacagctccattttatcgcgaaacttcaagctatgctcccaccgacgccagttcaaacaccagaagcccacatgaaagagcaaactaatgaagaggaagatatcgatattattggctga | ||||||
| Experiment | Laboratory | JJ | ||||
| Date | 17 Mar 2005 00:00:00 | |||||
| Genotype | ref-1(mu220) lag-2::gfp | |||||
| Inhibits | Predicted_gene | C17C3.8 | Inferred_automatically | RNAi_primary | ||
| F31A3.2 | Inferred_automatically | RNAi_primary | ||||
| F31A3.4 | Inferred_automatically | RNAi_primary | ||||
| C17C3.7 | Inferred_automatically | RNAi_primary | ||||
| C17C3.10 | Inferred_automatically | RNAi_primary | ||||
| Gene | WBGene00001968 | Inferred_automatically | RNAi_primary | |||
| WBGene00219272 | Inferred_automatically | RNAi_primary | ||||
| WBGene00001964 | Inferred_automatically | RNAi_primary | ||||
| WBGene00001967 | Inferred_automatically | RNAi_primary | ||||
| WBGene00001966 | Inferred_automatically | RNAi_primary | ||||
| WBGene00001965 | Inferred_automatically | RNAi_primary | ||||
| Transcript | F31A3.4.1 | Inferred_automatically | RNAi_primary | |||
| C17C3.8.1 | Inferred_automatically | RNAi_primary | ||||
| C17C3.24.1 | Inferred_automatically | RNAi_primary | ||||
| C17C3.10.1 | Inferred_automatically | RNAi_primary | ||||
| F31A3.2.1 | Inferred_automatically | RNAi_primary | ||||
| C17C3.7.1 | Inferred_automatically | RNAi_primary | ||||
| Species | Caenorhabditis elegans | |||||
| Interaction | WBInteraction000051974 | |||||
| Reference | WBPaper00025235 | |||||
| Phenotype | WBPhenotype:0001276 | Remark | Expression is usually not seen in wild-type ABa descendants activated by the second Notch interaction. These descendants however often express the lag-2::gfp transgene when the ref-1 family is depleted. | |||
| EQ_annotations | Anatomy_term | WBbt:0005906 | PATO:0000460 | |||
| Remark | Exact sequence used for RNAi not stated by authors, spliced coding region sequence of gene used for curation. | |||||
| Method | RNAi |
