WormBase Tree Display for Pseudogene: Y106G6D.5b:wp245
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| Y106G6D.5b:wp245 | SMap | S_parent | Sequence | Y106G6D | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (13) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Type | Coding_pseudogene | |||||
| Attributes | SubType | unprocessed_pseudogene | ||||
| Properties | Isoform | Accession_evidence | NDB | BJ107789 | ||
| Visible | Gene_history | WBGene00014965 | ||||
| Brief_identification | Curated Pseudogene | |||||
| Remark | [051202 pad] Added an alternate isoform for this pseudogene as there were additional alternate introns and splice sites from 1 transcript that were not accommodated in the 1st isoform. | Accession_evidence | NDB | BJ107789 | ||
| Curator_confirmed | WBPerson1983 | |||||
| [140918 pad] This gene has unusual splicing where there appear to be multiple non-productive introns that are seen at a reasonable high rate. The 2 coding Isoforms contain the introns with the highest transcriptiion levels (~6000 reads each) and the non-coding Isoforms also utilise the unusual introns (~13000 reads). More work needs to be done in the future on this locus when longer read data illucidates complete transcripts. | Person_evidence | WBPerson1983 | ||||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Method | history_pseudogene |
