WormBase Tree Display for Pseudogene: Y40B10A.4
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| Y40B10A.4 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y40B10A | ||
| Structure | Source_exons | 91 | 222 | ||
| 356 | 417 | ||||
| 2179 | 2298 | ||||
| 3938 | 4167 | ||||
| 2922 | 3011 | ||||
| 792 | 889 | ||||
| 3055 | 3727 | ||||
| 1895 | 2129 | ||||
| 1 | 46 | ||||
| 934 | 1639 | ||||
| DB_info | DB_remark | coding pseudogene | |||
| Origin | From_laboratory | RW | |||
| Species | Caenorhabditis elegans | ||||
| Type | Coding_pseudogene | ||||
| Attributes | SubType | unprocessed_pseudogene | |||
| Visible | Gene | WBGene00021489 | |||
| Brief_identification | Pseudogene containing an F-box domain | Curator_confirmed | WBPerson1983 | ||
| Corresponding_PCR_product | cenix:110-g5 | ||||
| mv_Y40B10A.f | |||||
| sjj2_Y40B10A.4 | |||||
| sjj_Y40B10A.f | |||||
| Corresponding_oligo_set (11) | |||||
| Variation (149) | |||||
| Microarray_results | SMD_Y40B10A.F | ||||
| 176824_at | |||||
| A_12_P100200 | |||||
| Aff_Y40B10A_112.D | |||||
| GPL14144_Y40B10A.4_1963-2022_0.958_1_A | |||||
| GPL19516_CGZ0045059 | |||||
| GPL21109_Y40B10A.4 | |||||
| GPL3518_CE26080 | |||||
| GPL8304_CE_WBGene00021489_A | |||||
| GPL8673_Y40B10A_4P01886 | |||||
| GPL9450_Y40B10A.4 | |||||
| cea2.i.47021 | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 12 Jun 2015 00:00:00 | WBPerson4025 | |||
| Remark | [140924 gw3] Converted this from a CDS to a Pseudogene because it has multiple premature STOP codons. | Curator_confirmed | WBPerson4025 | ||
| From_analysis | RNASeq | ||||
| [150612 gw3] Truncated the first exon slightly. | Curator_confirmed | WBPerson4025 | |||
| Method | Pseudogene |
