WormBase Tree Display for Pseudogene: B0391.10
expand all nodes | collapse all nodes | view schema
| B0391.10 | Evidence | Inferred_automatically | make_isoforms.pl | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_V | ||
| Structure | Source_exons | 1 | 555 | ||
| 610 | 695 | ||||
| 6530 | 6608 | ||||
| 6654 | 6745 | ||||
| 6797 | 7157 | ||||
| 7357 | 7596 | ||||
| 7644 | 7739 | ||||
| 7786 | 8119 | ||||
| DB_info | DB_remark | coding pseudogene | |||
| Origin | From_laboratory | HX | |||
| Species | Caenorhabditis elegans | ||||
| Type | Coding_pseudogene | ||||
| Attributes | SubType | unprocessed_pseudogene | |||
| Visible | Gene | WBGene00007165 | |||
| Brief_identification | Curated pseudogene | ||||
| Corresponding_PCR_product | cenix:52-d7 | ||||
| mv_B0391.10 | |||||
| sjj_B0391.10 | |||||
| Corresponding_oligo_set (12) | |||||
| Variation (135) | |||||
| Microarray_results | SMD_B0391.10 | ||||
| 172416_x_at | |||||
| A_12_P118000 | |||||
| Aff_B0391.10 | |||||
| GPL14144_B0391.10_221-280_0.968_1_A | |||||
| GPL19516_CGZ0000973 | |||||
| GPL21109_B0391.10 | |||||
| GPL8304_CE_WBGene00007165_A | |||||
| GPL8304_CE_WBGene00007165_B | |||||
| GPL8673_B0391_10P00197 | |||||
| GPL8673_B0391_10P00210 | |||||
| GPL9450_B0391.10 | |||||
| cea2.i.59103 | |||||
| RNASeq_FPKM (74) | |||||
| Last_reviewed | 22 Jun 2011 00:00:00 | WBPerson4025 | |||
| Remark | [110321 gw3] This gene looks like it should be a pseudogene - there is a lot of EST and RNASeq data around it indicating that this is part of a larger expressed region. | ||||
| [110622 gw3] Converted this gene from a CDS to a Pseudogene because the RNASeq intron splice data shows that there is a frameshift in the middle of this gene. | From_analysis | RNASeq_Hillier_elegans | |||
| Method | Pseudogene |
