WormBase Tree Display for Gene: WBGene00277155
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WBGene00277155 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-ngn-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA38786 | ||||||||
Molecular_name | PPA38786 | ||||||||
PPA38786.1 | |||||||||
PP63802 | |||||||||
Public_name | Ppa-ngn-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 24 Nov 2017 16:14:21 | WBPerson4055 | Event | Created | |||
2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-ngn-1 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-ngn-1 | ||||
5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-ngn-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ngn | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00283549 | ||||||||
Ortholog (27) | |||||||||
Paralog | WBGene00205170 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00206049 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable protein dimerization activity. Is an ortholog of C. elegans ngn-1. In C. elegans, ngn-1 is involved in several processes, including axon development; negative regulation of gliogenesis; and positive regulation of transcription by RNA polymerase II. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA38786 | |||||||
Corresponding_transcript | PPA38786.1 | ||||||||
Other_sequence | JI177188.1 | ||||||||
PPC06885_1 | |||||||||
Tcir_isotig08779 | |||||||||
Tcir_isotig22734 | |||||||||
Tcir_isotig17450 | |||||||||
Remark | [190208 pad] The CGC name Ppa-ngn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-ngn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |