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WormBase Tree Display for Gene: WBGene00270541

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Name Class

WBGene00270541SMapS_parentSequencecb25.fpc0103
IdentityVersion1
NameSequence_nameCBG30303
Molecular_nameCBG30303
CBG30303.1
CBP43013
Public_nameCBG30303
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00027723
Split_fromWBGene00027723
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.362377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.1836From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
6.02053From_analysisRNASeq.briggsae.WBls:0000002.control_mean
6.51561From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
2.08784From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
4.30172From_analysisRNASeq.briggsae.WBls:0000002.control_median
5.03736From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:00000030.256669From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
0.513337From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
0.329641From_analysisRNASeq.briggsae.WBls:0000003.control_mean
0.475585From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000040.178098From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
0.20115From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
0.224202From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
0.121717From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
0.149052From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
0.185946From_analysisRNASeq.briggsae.WBls:0000004.control_mean
0.256659From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:00000271.1188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
3.44739From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.83155From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.92846From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
20.9445From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
5.18792From_analysisRNASeq.briggsae.WBls:0000027.control_median
8.10979From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:000003516.7018From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000381.04755From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
14.909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
16.9472From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.35555From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
9.06483From_analysisRNASeq.briggsae.WBls:0000038.control_mean
9.13227From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:00000412.06864From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
2.46547From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
2.51268From_analysisRNASeq.briggsae.WBls:0000041.control_median
2.55988From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.08052From_analysisRNASeq.briggsae.WBls:0000041.control_mean
5.2281From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
3.80445From_analysisRNASeq.briggsae.WBls:0000041.control_mean
3.86524From_analysisRNASeq.briggsae.WBls:0000041.control_median
5.17059From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
5.33399From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000631.15522From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
1.38302From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
1.46219From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.53851From_analysisRNASeq.briggsae.WBls:0000063.control_mean
1.622From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
2.07011From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.54209From_analysisRNASeq.briggsae.WBls:0000063.control_median
2.11385From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.99053From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:00001012.46547From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.95729From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.27665From_analysisRNASeq.briggsae.total_over_all_stages.control_median
5.58663From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (25)
ParalogWBGene00024104Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: EB module; Cysteine-rich repeat; and EB domain. Is an ortholog of C. elegans D1044.7 and pqn-25.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG30303
Corresponding_transcriptCBG30303.1
Other_sequenceAcan_isotig08625
EY470454.1
FC539962.1
EY470963.1
CJC00793_1
CBC03309_1
ACC08464_1
Experimental_infoExpr_patternExpr1061767
Microarray_resultsGPL8303_CB6_WBGene00027723_A
GPL8303_CB6_WBGene00027723_B
GPL14143_CBG05211_4304-4363_0.930_5_B
GPL14143_CBG05211_4316-4375_0.916_11_C
GPL14143_CBG05211_4625-4684_0.948_3_A
MethodGene