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WormBase Tree Display for Gene: WBGene00270415

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Name Class

WBGene00270415SMapS_parentSequencecb25.fpc2887b
IdentityVersion1
NameSequence_nameCBG29987
Molecular_nameCBG29987
CBG29987.1
CBP40509
Public_nameCBG29987
SpeciesCaenorhabditis briggsae
HistoryVersion_change131 Aug 2016 10:30:13WBPerson4025EventSplit_fromWBGene00033170
Split_fromWBGene00033170
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000211.2325From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
15.0744From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
15.9783From_analysisRNASeq.briggsae.WBls:0000002.control_mean
21.6279From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
15.2605From_analysisRNASeq.briggsae.WBls:0000002.control_median
15.4466From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
15.8454From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:000000325.8234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
RNASeq.briggsae.WBls:0000003.control_median
27.4258From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
29.0283From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
24.7076From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
26.5198From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:000000411.5793From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
11.8647From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
12.1502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
10.6278From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
10.9138From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
11.9862From_analysisRNASeq.briggsae.WBls:0000004.control_mean
14.6598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.370673From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
0.440008From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
2.56051From_analysisRNASeq.briggsae.WBls:0000027.control_mean
6.87084From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.75831From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.18953From_analysisRNASeq.briggsae.WBls:0000027.control_mean
5.07662From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:00000354.0589From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003812.9151From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
1.56137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
5.70078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
7.3661From_analysisRNASeq.briggsae.WBls:0000038.control_mean
7.49396From_analysisRNASeq.briggsae.WBls:0000038.control_median
9.28714From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
WBls:000004124.1706From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
31.2516From_analysisRNASeq.briggsae.WBls:0000041.control_mean
33.1355From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
33.4874From_analysisRNASeq.briggsae.WBls:0000041.control_median
33.8392From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
33.861From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
33.502From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
33.6706From_analysisRNASeq.briggsae.WBls:0000041.control_median
35.0227From_analysisRNASeq.briggsae.WBls:0000041.control_mean
51.6277From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
WBls:000006310.1182From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
12.9323From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
13.4196From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
14.042From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
15.5494From_analysisRNASeq.briggsae.WBls:0000063.control_mean
27.235From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
13.5556From_analysisRNASeq.briggsae.WBls:0000063.control_median
13.6916From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
15.2398From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010111.5793From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.4949From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
12.5326From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.0422From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00279822
00279823
00279824
Ortholog (27)
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity and nuclease activity. Predicted to be involved in DNA repair. Is an ortholog of C. elegans mus-81. In C. elegans, mus-81 is involved in several processes, including DNA recombination; larval development; and positive regulation of embryonic development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG29987
Corresponding_transcriptCBG29987.1
Other_sequence (17)
Experimental_infoExpr_patternExpr1055872
Microarray_resultsGPL8303_CB6_WBGene00033170_A
GPL8303_CB6_WBGene00033170_B
GPL14143_CBG12181_5743-5802_0.930_10_B
GPL14143_CBG12181_5775-5834_0.735_381_A
GPL14143_CBG12181_6147-6206_0.887_47_C
MethodGene