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WormBase Tree Display for Gene: WBGene00264245

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Name Class

WBGene00264245SMapS_parentSequenceSRAE_chr2
IdentityVersion1
NameSequence_nameSRAE_2000401700
Molecular_nameSRAE_2000401700
SRAE_2000401700.1
SRP03474
Public_nameSRAE_2000401700
SpeciesStrongyloides ratti
HistoryVersion_change101 May 2015 10:45:54WBPerson4055EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00006777.02616From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272496
7.1299From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272503
7.31965From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272498
7.57584From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272504
7.57767From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272497
7.68555From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000677.Female.WBbt:0007833.ERP002187.ERX272502
WBls:00006782.84066From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322575
3.06232From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX322576
4.0851From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272499
4.11798From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272493
4.46197From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272495
4.47845From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272501
5.01632From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272500
5.14698From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000678.Female.WBbt:0007833.ERP002187.ERX272494
WBls:000068016.7839From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000680.Unknown.WBbt:0007833.ERP001672.ERX200444
WBls:00006823.57531From_analysisRNASeq.sratti.WBStrain00041039.WBls:0000682.Unknown.WBbt:0007833.ERP001672.ERX200443
GO_annotation00274424
00274425
00274426
00274427
00274428
OrthologCSP21.g4742Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11402Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9340Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g9348Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00285282Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00257236Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257354Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00260882Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00262161Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular matrix. Is an ortholog of C. elegans zmp-6.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSSRAE_2000401700
Corresponding_transcriptSRAE_2000401700.1
Other_sequenceCBC00808_1
PTC01718_1
MHC02365_1
MH04393
PT02305
JI168618.1
FG348553.1
TSC15083_1
ES566925.1
MH01622
Experimental_infoExpression_clusterWBPaper00050919:up_infective-L3_vs_free-living_mRNA
WBPaper00050919:up_infective-L3_vs_parasitic_mRNA
MethodGene