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WormBase Tree Display for Gene: WBGene00246496

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Name Class

WBGene00246496SMapS_parentSequenceOVOC_OM4_3
IdentityVersion1
NameSequence_nameOVOC9687
Molecular_nameOVOC9687
OVOC9687.1
OVP02548
Public_nameOVOC9687
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010154.569From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
88.812From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:0000104108.287From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
118.127From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
12.2067From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
14.2757From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
14.4429From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
15.1889From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
163.283From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
163.817From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
178.051From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
18.6604From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
217.484From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
31.6418From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
40.6229From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
59.0994From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
74.2221From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
81.9606From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
WBls:000010795.9061From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108131.02From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
198.56From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
414.621From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
50.0386From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066416.4341From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
24.445From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
8.42318From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
OrthologWBGene00150928Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190092Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00033950Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00269318Brugia malayiFrom_analysisWormBase-Compara
WBGene00017663Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129127Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214555Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00217985Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g7181Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11227Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6959Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12193Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g9266Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14688Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g7000Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g19489Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11744Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15982Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23107Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8342Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00367.g9844Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-F21D12.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold526.g3075Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00343.g9791Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09456Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006480Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10143Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g14486Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20257600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00054322Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00099704Pristionchus pacificusFrom_analysisWormBase-Compara
chrII_pilon.g4995Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00286618Trichuris murisFrom_analysisWormBase-Compara
WBGene00290247Trichuris murisFrom_analysisWormBase-Compara
WBGene00290249Trichuris murisFrom_analysisWormBase-Compara
WBGene00290965Trichuris murisFrom_analysisWormBase-Compara
WBGene00301830Trichuris murisFrom_analysisWormBase-Compara
WBGene00301832Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00236843Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243228Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245562Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245651Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246397Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246592Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247232Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247233Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247296Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans F21D12.3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC9687
Corresponding_transcriptOVOC9687.1
Other_sequenceAA618953.1
AA720424.1
BF718836.1
OVC00305_1
EX543702.1
EX543586.1
BU089103.1
EX534801.1
EX534948.1
NAC02491_1
JI466969.1
ACC09978_1
EX537935.1
EX553532.1
BMC06340_1
Experimental_infoExpression_clusterWBPaper00050764:Ov-L3D3_enriched
MethodGene