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WormBase Tree Display for Gene: WBGene00245608

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Name Class

WBGene00245608SMapS_parentSequenceOVOC_OM3_79
IdentityVersion2
NameCGC_nameOvo-vab-7From_analysisInferred_from_orthology
Sequence_nameOVOC8799
Molecular_nameOVOC8799
OVOC8799.1
OVP10828
Public_nameOvo-vab-7
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-vab-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvab
RNASeq_FPKMWBls:00001011.76581From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
2.67168From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.147573From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
0.400732From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
0.589154From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
1.34496From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
1.39189From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
1.45147From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
2.08015From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
2.27555From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
3.06094From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
3.81068From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
4.96634From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
WBls:00001079.29621From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001084.36071From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
7.06967From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
8.40449From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
8.4438From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:00006643.43975From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
4.04861From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
4.65747From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00259575
OrthologWBGene00154556Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00037726Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225401Brugia malayiFrom_analysisWormBase-Compara
WBGene00006873Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207922Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g4418Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16077Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14472Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18555Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22576Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11578Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12201Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16666Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g11797Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22964Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00891.g14779Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vab-7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7269Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00519.g12380Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11481Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010380Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03684Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g9222Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30109700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00078737Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00195124Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8961Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00262989Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285520Trichuris murisFrom_analysisWormBase-Compara
WBGene00297273Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00236919Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00236944Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00238955Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239412Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239414Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241130Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241653Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00241889Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00242657Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243065Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243095Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244490Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246761Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247281Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247363Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247366Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248105Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248559Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249156Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans vab-7. In C. elegans, vab-7 is involved in cell fate specification and negative regulation of transcription by RNA polymerase II.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8799
Corresponding_transcriptOVOC8799.1
Other_sequenceMH02429
Acan_isotig12015
JI236393.1
FG587342.1
MHC06441_1
Dviv_isotig34250
Oden_isotig25142
CBC09109_1
MethodGene