Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00245439

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00245439SMapS_parentSequenceOVOC_OM3_77
IdentityVersion2
NameCGC_nameOvo-vps-33.1From_analysisInferred_from_orthology
Sequence_nameOVOC8630
Molecular_nameOVOC8630
OVOC8630.1
OVP03510
Public_nameOvo-vps-33.1
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:34WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-vps-33.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:000010114.3424From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
16.2033From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:000010411.1041From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
11.86From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
1.81698From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
18.8875From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
24.1327From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
25.1031From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
25.9638From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
2.71733From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
29.7122From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
31.478From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
32.8649From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
33.335From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
35.2261From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
3.75412From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
6.18404From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
8.06066From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
WBls:00001076.60549From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010812.2931From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
14.4395From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
18.7394From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
3.70051From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066414.2453From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
14.8373From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
15.4293From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00259374
OrthologWBGene00152678Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00035639Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00231056Brugia malayiFrom_analysisWormBase-Compara
WBGene00015130Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135975Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g5065Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g5218Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18141Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g10397Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15413Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8517Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9332Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g13297Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6141Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1368Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00269.g8206Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-vps-33.1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g9831Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_06902.g37143Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07311.g37612Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_11458.g40384Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18431Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_18434Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008595Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_008598Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13466Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13469Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6824Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30273600Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00069637Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00069639Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00115057Pristionchus pacificusFrom_analysisWormBase-Compara
chrIII_pilon.g8454Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00263137Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293195Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00239568Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00239819Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240430Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244384Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans vps-33.1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8630
Corresponding_transcriptOVOC8630.1
Other_sequenceACC19937_1
JI460363.1
EL888857.1
CRC01693_1
MHC08515_1
GP01517
EW743635.1
JI169731.1
MethodGene