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WormBase Tree Display for Gene: WBGene00245273

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Name Class

WBGene00245273SMapS_parentSequenceOVOC_OM3_75
IdentityVersion2
NameCGC_nameOvo-unc-68From_analysisInferred_from_orthology
Sequence_nameOVOC8464
Molecular_nameOVOC8464
OVOC8464.1
OVP09490
Public_nameOvo-unc-68
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:30WBPerson4055Name_changeCGC_nameOvo-unc-68
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001015.52915From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
9.7101From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:000010412.5659From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
1.30716From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
15.8216From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
1.81316From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
1.91391From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
2.13664From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
3.04227From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
3.23413From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
3.43672From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
3.5235From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
5.3875From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
5.48901From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
5.56929From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
5.80951From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
6.05123From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
9.09852From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:00001077.48015From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010820.1524From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
23.4328From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
32.4228From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
4.6017From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:000066423.03From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
32.4361From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
41.8421From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00259149
00259150
00259151
00259152
00259153
00259154
00259155
00259156
00259157
00259158
OrthologWBGene00163093Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193580Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193883Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193891Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00038324Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225260Brugia malayiFrom_analysisWormBase-Compara
WBGene00006801Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00124340Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00209587Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00216080Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218877Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g2262Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4665Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g3330Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8818Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5594Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19710Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10857Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1182Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g12556Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g19315Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g4569Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g21529Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00439.g10869Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_01390.g16355Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02379.g17124Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02506.g17262Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04140.g18630Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05389.g19560Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06964.g20594Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_10065.g22436Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13819.g24396Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_16100.g25259Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_18335.g25942Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-68Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g19947Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold556.g3752Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold556.g3753Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00905.g16628Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_15641Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018015Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10076Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4808Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4810Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50223100Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00052257Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrV_pilon.g14545Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00276305Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00256983Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00296466Trichuris murisFrom_analysisWormBase-Compara
WBGene00296467Trichuris murisFrom_analysisWormBase-Compara
WBGene00301423Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00241277Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity and ryanodine-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport and intracellular calcium ion homeostasis. Predicted to be located in membrane. Is an ortholog of C. elegans unc-68. In C. elegans, unc-68 is involved in locomotion; positive regulation of programmed cell death; and protein localization to organelle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC8464
Corresponding_transcriptOVOC8464.1
Other_sequenceDviv_isotig22426
MHC10953_1
CGC00447_1
ACC24297_1
EY471765.1
Tcol_isotig13464
MH00533
JI481930.1
Dviv_isotig31562
ACC32005_1
MHC01824_1
Oden_isotig02448
MC01547
MIC00484_1
MH04861
CRC02192_1
MH00548
HS01016
AS09195
MCC03841_1
HBC10268_1
MCC00196_1
Dviv_isotig26223
MC00131
MH00549
Tcol_isotig06757
MHC00575_1
SSC06493_1
BXC02685_1
FE927016.1
Oden_isotig02449
Tcol_isotig21968
MH04786
JI172189.1
FG587269.1
JI163779.1
Acan_isotig13771
Tcol_isotig22376
MHC01328
JI464195.1
Dviv_isotig22425
SS00686
Oden_isotig02451
ASC06046_1
MJ02207
MIC00292_1
HSC01335_1
MJ04620
JO469349.1
MHC01250_1
MH06345
JI482858.1
Hbac_isotig01873
BMC15717_1
MJC04189_1
FG580757.1
Tcir_isotig09614
JI464804.1
MHC11325_1
MHC05560_1
Acan_isotig10352
EY458385.1
MI00540
Oden_isotig02450
FE927382.1
ES743277.1
MethodGene