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WormBase Tree Display for Gene: WBGene00244388

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Name Class

WBGene00244388SMapS_parentSequenceOVOC_OM3_23
IdentityVersion2
NameCGC_nameOvo-unc-80From_analysisInferred_from_orthology
Sequence_nameOVOC7579
Molecular_nameOVOC7579
OVOC7579.1
OVP07446
Public_nameOvo-unc-80
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:32WBPerson4055Name_changeCGC_nameOvo-unc-80
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00001011.65436From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
3.22509From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.219241From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
0.410734From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
0.431215From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
0.434256From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.721797From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
1.28184From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
1.2892From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
1.56727From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
1.65139From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
1.65734From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
1.66658From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
1.7252From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
2.1731From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
2.61292From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
2.77947From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
6.04373From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
WBls:00001072.95516From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:000010811.8696From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
1.54817From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
16.1551From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
9.85762From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:00006646.26763From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
6.71266From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
7.15769From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
OrthologWBGene00158228Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027983Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00223829Brugia malayiFrom_analysisWormBase-Compara
WBGene00006812Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122691Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g2227Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16091Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7029Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g7952Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20590Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7280Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1186Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2252Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9934Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7116Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g20767Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g1938Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00892.g14782Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00892.g14787Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02666.g17407Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_02666.g17408Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03452.g18097Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_03620.g18234Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12140.g23586Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-80Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21785Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27697Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27698Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02725.g27699Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03494.g30373Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04303.g32591Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04303.g32592Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07000.g37259Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19881Caenorhabditis latensFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07312Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5617Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50426200Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00063566Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00107425Pristionchus pacificusFrom_analysisWormBase-Compara
chrV_pilon.g18189Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00294580Trichuris murisFrom_analysisWormBase-Compara
WBGene00296023Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00244389Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Cation channel complex component UNC80, N-terminal and UNC80 N-terminal. Is an ortholog of C. elegans unc-80. In C. elegans, unc-80 is involved in several processes, including monoatomic cation homeostasis; positive regulation of locomotion; and response to anesthetic.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC7579
Corresponding_transcriptOVOC7579.1
Other_sequenceJO470118.1
BU088827.1
AB300636.1
JI255268.1
EL888582.1
CV200017.1
AB300629.1
JI176867.1
EX550891.1
Dviv_isotig26964
MP02221
AB300656.1
JI472366.1
EL888492.1
TX00500
AB300655.1
MA03358
JI163971.1
Acan_isotig02594
EX539047.1
BXC02810_1
DI00883
EL887642.1
CV199445.1
PT04601
JI179318.1
ASC02166_1
MA03105
FG350781.1
EL889692.1
EL889709.1
JI173071.1
JI219232.1
CR02765
AB300628.1
AB300637.1
JI170851.1
JI167492.1
EL887909.1
JI474477.1
JI218284.1
HC06290
CR07395
AB300633.1
AB300626.1
ASC11260_1
GP00122
JI166934.1
MI03305
AB300635.1
JI231556.1
DN152914.1
BE239030.1
XI00817
CR10757
AB300631.1
HBC19296_1
JO474876.1
AB300625.1
ACC25462_1
JI470579.1
MIC02836_1
HC06504
AB300632.1
AB300654.1
SS01580
AB300627.1
GO249227.1
JI180880.1
ASC00723_3
Dviv_isotig30175
JI163928.1
Acan_isotig19972
ASC00287_4
BM00421
Oden_isotig21057
JI165936.1
HC06302
XI03240
ACC02687_1
JI474591.1
HO058590.1
AB300649.1
TM02654
JI477398.1
AB300630.1
JI464934.1
TMC03093_1
JK315320.1
GO240682.1
JI165879.1
AB300641.1
JI178118.1
MethodGene