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WormBase Tree Display for Gene: WBGene00243228

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Name Class

WBGene00243228SMapS_parentSequenceOVOC_OM2_101
IdentityVersion1
NameSequence_nameOVOC6419
Molecular_nameOVOC6419
OVOC6419.1
OVP06920
Public_nameOVOC6419
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000010127.0326From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
39.8963From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.861568From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
1.10064From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
11.2832From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
11.9186From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
1.63076From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
16.6827From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
2.08791From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
26.7699From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
27.2954From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
30.2171From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
32.2577From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
3.31817From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
38.6413From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
4.41876From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
50.9577From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
7.48173From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
WBls:000010766.2626From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108122.97From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
134.975From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
179.043From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
54.8919From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
WBls:0000664144.317From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
47.9895From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
96.1533From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
OrthologWBGene00194298Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00194536Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00031170Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226610Brugia malayiFrom_analysisWormBase-Compara
WBGene00012529Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00129337Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g1494Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g993Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g11551Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g22232Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17680Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18448Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g451Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1293Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g17259Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23549Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25887Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2223Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00061.g3040Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g19463Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold502.g2351Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01490.g21235Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_11757Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_016402Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00389Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20255Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g21322Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g4503Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50291700Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00065071Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00093156Pristionchus pacificusFrom_analysisWormBase-Compara
chrV_pilon.g15520Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00255813Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257879Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286618Trichuris murisFrom_analysisWormBase-Compara
WBGene00290247Trichuris murisFrom_analysisWormBase-Compara
WBGene00290249Trichuris murisFrom_analysisWormBase-Compara
WBGene00290965Trichuris murisFrom_analysisWormBase-Compara
WBGene00301830Trichuris murisFrom_analysisWormBase-Compara
WBGene00301832Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00236843Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245562Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245651Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246397Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246496Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246592Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247232Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247233Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00247296Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Amino acid transporter, transmembrane domain and Transmembrane amino acid transporter protein. Is an ortholog of C. elegans Y32F6A.4.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC6419
Corresponding_transcriptOVOC6419.1
Other_sequenceBMC03315_1
SRC01474_1
Oden_isotig19176
Oden_isotig06441
JI170343.1
EX550894.1
FC554831.1
EX543829.1
JI464807.1
FC547455.1
BXC03177_1
PSC04798_1
Oden_isotig06437
FC817243.1
HGC04351_1
ACC09340_1
MI05620
Acan_isotig02408
HC05992
HG00284
BXC01185_1
Oden_isotig06443
HGC12290_1
CBC12622_1
JI168742.1
HGC05054_1
HG00972
HCC00196_1
BXC07592_1
Tcol_isotig19432
Oden_isotig06442
MIC04758_1
Oden_isotig06438
HG05413
EX542647.1
JI221544.1
GW411533.1
BUC00205_1
Oden_isotig06440
SR02824
FC541225.1
FC546510.1
Oden_isotig06439
EX539068.1
Experimental_infoExpression_clusterWBPaper00050764:Ov-L3D3_enriched
MethodGene