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WormBase Tree Display for Gene: WBGene00239568

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Name Class

WBGene00239568SMapS_parentSequenceOVOC_OM1b_119
IdentityVersion2
NameCGC_nameOvo-unc-18From_analysisInferred_from_orthology
Sequence_nameOVOC2759
Molecular_nameOVOC2759
OVOC2759.1
OVP06317
Public_nameOvo-unc-18
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:33WBPerson4055Name_changeCGC_nameOvo-unc-18
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000010114.0178From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
21.6636From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
WBls:00001040.463038From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
10.8813From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
11.4861From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
13.277From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
13.9247From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
14.1109From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
1.45918From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
18.5539From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
0From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
20.0615From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
21.1529From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
2.48225From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
34.7977From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
5.48725From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
7.3591From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
8.28032From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
WBls:000010726.5556From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:0000108102.292From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
40.1628From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
69.3575From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
70.6041From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
WBls:000066427.1646From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
32.9701From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
38.7757From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
GO_annotation00253509
OrthologWBGene00155616Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00036613Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00221426Brugia malayiFrom_analysisWormBase-Compara
WBGene00234090Brugia malayiFrom_analysisWormBase-Compara
WBGene00006757Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00135188Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214490Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3312Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4144Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14634Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19990Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2860Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20563Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g20564Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1698Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17247Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8806Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20843Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00214.g7185Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_09977.g22391Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-18Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12404Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00373.g10337Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00126Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024825Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04356Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g21263Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0209400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00051283Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g19450Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00273414Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264659Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290156Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00239819Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00240430Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244384Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245439Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Is an ortholog of C. elegans unc-18. In C. elegans, unc-18 is involved in chemical synaptic transmission and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC2759
Corresponding_transcriptOVOC2759.1
Other_sequenceFG584102.1
Acan_isotig20626
XI00463
Acan_isotig03365
Tcir_isotig24839
BXC05950_1
HS00282
CRC04275_1
Tcir_isotig20824
JI169288.1
ES411457.1
SC00765
EY469400.1
ES561067.1
FG355872.1
HBC15028_1
CJC18373_1
ACC09517_1
Oden_isotig12932
CRC07039_1
Tcol_isotig04779
FC552916.1
ES570179.1
Tcol_isotig04780
ACC16245_1
HBC00493_1
FC546758.1
Oden_isotig24178
HSC00604_1
EW743383.1
CR01301
Oden_isotig12933
Tcol_isotig04778
XIC01192_1
EE724186.1
HC05789
FC551410.1
Oden_isotig24729
FK802737.1
HSC01469
Tcir_isotig06928
FC550352.1
GR979115.1
FG350289.1
FC541454.1
Hbac_isotig00325
ACC19457_1
HS01379
Acan_isotig03364
EY460228.1
ES410353.1
DN152859.1
Hbac_isotig00324
CR08014
FK802781.1
Dviv_isotig23225
TSC13280_1
EY459696.1
FK807207.1
Oden_isotig27983
ACC17213_1
EX567052.1
JI468461.1
TSC09387_1
HBC01518_1
FC550810.1
MethodGene