Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00239064

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00239064SMapS_parentSequenceOVOC_OM1b_113
IdentityVersion2
NameCGC_nameOvo-syx-2From_analysisInferred_from_orthology
Sequence_nameOVOC2255
Molecular_nameOVOC2255
OVOC2255.1
OVP00788
Public_nameOvo-syx-2
SpeciesOnchocerca volvulus
HistoryVersion_change129 Nov 2013 15:05:33WBPerson3111EventImportedMAKER import
224 Jan 2014 16:01:34WBPerson4055Name_changeCGC_nameOvo-syx-2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsyx
RNASeq_FPKMWBls:00001014.04309From_analysisRNASeq.ovolvulus.total_over_all_stages.control_mean
4.27854From_analysisRNASeq.ovolvulus.total_over_all_stages.control_median
WBls:00001040.364033From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
0.918785From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
10.3188From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
1.12474From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
12.3973From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
1.29522From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
1.94687From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
4.41308From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
4.49701From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
4.65011From_analysisRNASeq.ovolvulus.WBls:0000104.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
4.65286From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
4.70612From_analysisRNASeq.ovolvulus.WBls:0000104.control_mean
5.30597From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
5.99956From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
6.02386From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
6.68362From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
WBls:00001071.61634From_analysisRNASeq.ovolvulus.WBls:0000107.control_mean
RNASeq.ovolvulus.WBls:0000107.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
WBls:00001080.53834From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
2.62061From_analysisRNASeq.ovolvulus.WBls:0000108.control_mean
3.43615From_analysisRNASeq.ovolvulus.WBls:0000108.control_median
RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
3.88733From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
WBls:00006644.144From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
4.43905From_analysisRNASeq.ovolvulus.WBls:0000664.control_mean
RNASeq.ovolvulus.WBls:0000664.control_median
4.7341From_analysisRNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
GO_annotation00252971
00252972
OrthologWBGene00155789Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00029415Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00229294Brugia malayiFrom_analysisWormBase-Compara
WBGene00006372Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128918Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g3680Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7890Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g16723Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g18125Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20464Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g19096Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g16324Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16485Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15972Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g10990Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00350.g9592Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-syx-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g11089Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00317.g9288Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01531Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_025795Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01556Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13097Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0117000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00065322Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrX_pilon.g20497Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00256663Strongyloides rattiFrom_analysisWormBase-Compara
ParalogWBGene00242557Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244303Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00244919Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00246007Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00248685Onchocerca volvulusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in vesicle-mediated transport. Predicted to be located in membrane. Is an ortholog of C. elegans syx-2. In C. elegans, syx-2 is involved in short-term memory.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSOVOC2255
Corresponding_transcriptOVOC2255.1
Other_sequenceMP00910
DW718378.1
Acan_isotig09352
JI483809.1
EL889230.1
JI471702.1
MA03017
Acan_isotig12504
FE913951.1
MC05741
MethodGene