WormBase Tree Display for Gene: WBGene00236948

WBGene00236948 SMap: S_parent: Sequence: OVOC_OM1b_5
  Identity: Version: 2
    Name: CGC_name: Ovo-unc-11 From_analysis: Inferred_from_orthology
      Sequence_name: OVOC139
      Molecular_name: OVOC139
        OVOC139.1
        OVP02630
      Public_name: Ovo-unc-11
    Species: Onchocerca volvulus
    History: Version_change: 1 29 Nov 2013 15:05:32 WBPerson3111 Event: Imported: MAKER import
        2 24 Jan 2014 16:01:33 WBPerson4055 Name_change: CGC_name: Ovo-unc-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000101 17.2367 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_median
        17.7029 From_analysis: RNASeq.ovolvulus.total_over_all_stages.control_mean
      WBls:0000104 12.6252 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450841
        13.7034 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978159
        14.0821 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978156
        14.5299 From_analysis: RNASeq.ovolvulus.WBls:0000104.control_mean
        14.579 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978161
        17.409 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.ERP001350.ERX200394
        17.4648 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978158
        19.6221 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978157
        1.97192 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450842
        2.04529 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX450840
        24.7125 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978160
        2.48162 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529044
        29.7728 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978163
        3.31931 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.ERP001350.ERX529045
        36.423 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Female.WBbt:0007833.SRP056861.SRX978164
        7.73706 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000104.Male.WBbt:0007833.SRP056861.SRX978162
      WBls:0000107 19.3231 From_analysis: RNASeq.ovolvulus.WBls:0000107.control_mean
            RNASeq.ovolvulus.WBls:0000107.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000107.Unknown.WBbt:0007833.ERP001350.ERX200395
      WBls:0000108 17.0643 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200391
        35.6069 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_mean
        40.1111 From_analysis: RNASeq.ovolvulus.WBls:0000108.control_median
            RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200392
        49.6454 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000108.Unknown.WBbt:0007833.ERP001350.ERX200393
      WBls:0000664 21.3002 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200396
        22.6854 From_analysis: RNASeq.ovolvulus.WBls:0000664.control_mean
            RNASeq.ovolvulus.WBls:0000664.control_median
        24.0705 From_analysis: RNASeq.ovolvulus.WBStrain00041977.WBls:0000664.Unknown.WBbt:0007833.ERP001350.ERX200397
    GO_annotation: 00250734
      00250735
      00250736
      00250737
      00250738
    Ortholog: WBGene00142822 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00161380 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00033023 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00222778 Brugia malayi From_analysis: WormBase-Compara
      WBGene00006751 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00176798 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00211830 Caenorhabditis japonica From_analysis: WormBase-Compara
      CBOVI.g9380 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2311 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4284 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6899 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1874 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20430 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g13435 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g336 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9877 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16458 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_06694.g20424 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-11 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6740 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00111.g4616 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08185 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002185 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08210 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10733 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g18455 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10164000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00062303 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrI_pilon.g578 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00273988 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00261583 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00295407 Trichuris muris From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable 1-phosphatidylinositol binding activity and clathrin binding activity. Predicted to be involved in clathrin coat assembly. Predicted to be located in clathrin-coated vesicle. Is an ortholog of C. elegans unc-11. In C. elegans, unc-11 is involved in several processes, including endocytosis; necroptotic process; and protein localization to postsynaptic membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: OVOC139
    Corresponding_transcript: OVOC139.1
    Other_sequence: BG485923.1
      OVC09345_1
      ASC18032_1
      Acan_isotig19460
      EX555116.1
      ACC31289_1
      JI174424.1
      JI177385.1
      Acan_isotig00468
      FG586873.1
      MH09386
      BMC01517_1
      ACC08090_1
      Dviv_isotig29208
      Dviv_isotig33317
      Acan_isotig00464
      JI481505.1
      MC00485
      MHC06963_1
      PTC00299_1
      EX559834.1
      FG581594.1
      PT01021
      Acan_isotig00465
      JI470642.1
      MCC03384_1
      CR03909
      CRC10493_1
      EX535660.1
      CB832464.1
      AS15805
      Oden_isotig18668
      FG584715.1
      AS15755
      FC821823.1
      JI461746.1
      WBC02775_1
      FG582599.1
      SR03507
      JO469394.1
  Method: Gene