WormBase Tree Display for Gene: WBGene00229088
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| WBGene00229088 | SMap | S_parent | Sequence | Bm_v4_Chr2_contig_001 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Bma-ptp-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | Bm8827 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | TAG8827 | Curator_confirmed | WBPerson4055 | ||||||
| TAG8430 | |||||||||
| Bm1_03415A | Curator_confirmed | WBPerson4055 | |||||||
| Bm1_03415 | Person_evidence | WBPerson5841 | |||||||
| Public_name | Bma-ptp-3 | ||||||||
| Species | Brugia malayi | ||||||||
| History | Version_change | 1 | 10 Dec 2012 14:43:25 | WBPerson4055 | Event | Created | |||
| 2 | 09 Oct 2015 09:28:24 | WBPerson4055 | Event | Acquires_merge | WBGene00228691 | ||||
| 3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Bma-ptp-3 | ||||
| 4 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 04 Feb 2020 15:43:56 | WBPerson1983 | Name_change | CGC_name | Bma-ptp-3 | ||||
| 6 | 04 Jun 2020 14:38:22 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Bma-ptp-3 | ||||
| Acquires_merge | WBGene00228691 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ptp | ||||||||
| RNASeq_FPKM (11) | |||||||||
| Ortholog (53) | |||||||||
| Paralog (33) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin; Immunoglobulin subtype 2; Immunoglobulin domain; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans ptp-3. In C. elegans, ptp-3 is involved in several processes, including embryonic morphogenesis; nervous system development; and neuroblast migration. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Bm8827a | |||||||
| Bm8827b | |||||||||
| Bm8827c | |||||||||
| Bm8827d | |||||||||
| Bm8827e | |||||||||
| Corresponding_CDS_history | Bm8827a:bm271 | ||||||||
| Bm8827b:bm271 | |||||||||
| Bm8827c:bm271 | |||||||||
| Corresponding_transcript | Bm8827a.1 | ||||||||
| Bm8827b.1 | |||||||||
| Bm8827c.1 | |||||||||
| Bm8827d.1 | |||||||||
| Bm8827e.1 | |||||||||
| Other_sequence (42) | |||||||||
| Experimental_info | Expression_cluster | WBPaper00051007:downregulated_F30_vs_L4 | |||||||
| WBPaper00051007:downregulated_M120_vs_F120 | |||||||||
| WBPaper00051007:upregulated_M30_vs_L4 | |||||||||
| WBPaper00051007:upregulated_M120_vs_M30 | |||||||||
| WBPaper00061765:L3_vs_Adult_Upregulated | |||||||||
| WBPaper00061765:L4_vs_Adult_Upregulated | |||||||||
| Reference | WBPaper00045439 | ||||||||
| WBPaper00048750 | |||||||||
| Remark | [190208 pad] The CGC name Bma-ptp-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [200603 pad] The CGC name Bma-ptp-3 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00222357 | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
