WormBase Tree Display for Gene: WBGene00215963

WBGene00215963 SMap: S_parent: Sequence: Cjap.Contig8724
  Identity: Version: 2
    Name: CGC_name: Cjp-pad-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA40115
      Molecular_name: CJA40115
        CJA40115.1
        JA43865
      Public_name: Cjp-pad-2.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:56 WBPerson4055 Event: Imported: Augustus import
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cjp-pad-2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pad
    RNASeq_FPKM: WBls:0000004 2.92671 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 2.30804 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 0.778101 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
        1.06833 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.35855 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
      WBls:0000041 0.197013 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        12.8745 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        13.4973 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        13.6839 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        1.69248 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.81402 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.90807 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        2.89641 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        3.88476 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        6.19401 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 1.90807 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        4.37873 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    Ortholog (16)
    Paralog: WBGene00138167 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00176939 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210675 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: GDP-fucose protein O-fucosyltransferase. Is an ortholog of C. elegans pad-2. In C. elegans, pad-2 is involved in protein O-linked fucosylation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA40115
    Corresponding_transcript: CJA40115.1
    Other_sequence: EX013604.1
      HBC07437_1
      Acan_isotig09955
  Method: Gene