WormBase Tree Display for Gene: WBGene00212097

WBGene00212097 SMap: S_parent: Sequence: Cjap.Contig18099
  Identity: Version: 5
    Name: CGC_name: Cjp-ced-5.2 From_analysis: Inferred_from_orthology
      Sequence_name: CJA36250
      Molecular_name: CJA36250a
        CJA36250a.1
        JA52762
        CJA36250b
        JA62833
        CJA36250c
        JA46540
        CJA36250b.1
        CJA36250c.1
      Other_name: Cjp-ced-5 From_analysis: Inferred_from_orthology
      Public_name: Cjp-ced-5.2
    Species: Caenorhabditis japonica
    History: Version_change: 1 28 Jul 2011 11:15:56 WBPerson4055 Event: Imported: Augustus import
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-ced-5
        3 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Cjp-ced-5.2
                Other_name: Cjp-ced-5
        4 04 Feb 2020 15:43:56 WBPerson1983 Name_change: CGC_name: Cjp-ced-5
                Other_name: Cjp-ced-5.2
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Cjp-ced-5.2
                Other_name: Cjp-ced-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ced
    RNASeq_FPKM: WBls:0000004 3.4217 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 4.52431 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 1.04667 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        1.33287 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        1.61907 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1.0813 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        1.55062 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        1.98068 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        1.98894 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        3.52478 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.28111 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        5.06062 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        7.19079 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        7.67288 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        7.72301 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 1.98894 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        3.45081 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00234443
      00234444
    Ortholog (34)
    Paralog: WBGene00127479 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133981 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134894 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00210694 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216606 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans ced-5. In C. elegans, ced-5 is involved in several processes, including left/right axis specification; positive regulation of distal tip cell migration; and vesicle-mediated transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA36250a
      CJA36250b
      CJA36250c
    Corresponding_transcript: CJA36250a.1
      CJA36250b.1
      CJA36250c.1
    Other_sequence: JI164071.1
      Dviv_isotig13167
      PT02057
      Oden_isotig23377
  Experimental_info: Expr_pattern: Expr1076626
    Microarray_results: GPL14145_CJA08276_10035-10094_0.947_2_C
      GPL14145_CJA08276_9633-9692_0.906_15_A
      GPL14145_CJA08276_9954-10013_0.963_1_B
  Method: Gene