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WormBase Tree Display for Gene: WBGene00210828

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Name Class

WBGene00210828SMapS_parentSequenceCjap.Contig6717
IdentityVersion2
NameCGC_nameCjp-vab-23.2From_analysisInferred_from_orthology
Sequence_nameCJA34981
Molecular_nameCJA34981a
CJA34981a.1
JA65637
CJA34981b
JA55345
CJA34981b.1
Public_nameCjp-vab-23.2
SpeciesCaenorhabditis japonica
HistoryVersion_change128 Jul 2011 11:15:56WBPerson4055EventImportedAugustus import
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCjp-vab-23.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvab
RNASeq_FPKMWBls:000000453.9971From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000279.72838From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003810.5311From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
8.52431From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
9.52771From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
WBls:00000411.71768From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
2.56383From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.59961From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
3.05506From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
3.23132From_analysisRNASeq.japonica.WBls:0000041.control_median
3.40759From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
3.73127From_analysisRNASeq.japonica.WBls:0000041.control_mean
4.65247From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
5.7998From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
6.05413From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
WBls:00001014.65247From_analysisRNASeq.japonica.total_over_all_stages.control_median
8.66393From_analysisRNASeq.japonica.total_over_all_stages.control_mean
Ortholog (31)
ParalogWBGene00215507Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00214117Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00214376Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger-containing protein and Zinc finger C4H2 domain-containing protein. Is an ortholog of C. elegans vab-23. In C. elegans, vab-23 is involved in several processes, including embryonic body morphogenesis; epidermis morphogenesis; and vulval development.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA34981a
CJA34981b
Corresponding_transcriptCJA34981a.1
CJA34981b.1
Other_sequenceCR10729
CRC10895_1
Dviv_isotig25353
MethodGene