WormBase Tree Display for Gene: WBGene00201633
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WBGene00201633 | SMap | S_parent | Sequence | F13D11 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | F13D11.20 | ||||||
Molecular_name | F13D11.20 | |||||||
Other_name | CELE_F13D11.20 | Accession_evidence | NDB | BX284606 | ||||
Public_name | F13D11.20 | |||||||
DB_info | Database | NDB | locus_tag | CELE_F13D11.20 | ||||
NCBI | gene | 13220804 | ||||||
RefSeq | protein | NR_071162.1 | ||||||
RNAcentral | URSid | URS00004181A7 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 06 Oct 2010 16:59:23 | WBPerson4025 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001263 | ||||||
Allele | WBVar02064004 | |||||||
WBVar01150088 | ||||||||
WBVar01150089 | ||||||||
WBVar01150090 | ||||||||
WBVar01150091 | ||||||||
WBVar01500067 | ||||||||
RNASeq_FPKM (74) | ||||||||
Structured_description | Automated_description | Enriched in sensory neurons based on RNA-seq studies. Is affected by several genes including daf-2; eat-2; and cep-1 based on RNA-seq and microarray studies. Is affected by Cry5B and Oligosaccharides based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info | Corresponding_transcript | F13D11.20 | ||||||
Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_downregulated_normal | ||||||
WBPaper00055226:adr-1(tm668)_upregulated | ||||||||
WBPaper00055334:DLC-1_interacting | ||||||||
WBPaper00055386:daf-2(e1370)_upregulated | ||||||||
WBPaper00055386:eat-2(ad465)_upregulated | ||||||||
WBPaper00056167:Cry5B_upregulated | ||||||||
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected | ||||||||
WBPaper00060661:sensory-neuron_enriched | ||||||||
WBPaper00064306:Agaro-oligosaccharides_upregulated | ||||||||
Map_info | Positive | Positive_clone | F13D11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | X | -4.2736 | ||||||
Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
Accession_evidence | modENCODE | ncRNA_frag5596 | ||||||
Curator_confirmed | WBPerson4025 | |||||||
Method | Gene |