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WormBase Tree Display for Gene: WBGene00200208

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Name Class

WBGene00200208SMapS_parentSequenceC47D2
IdentityVersion1
NameSequence_nameC47D2.5
Molecular_nameC47D2.5
Other_nameCELE_C47D2.5Accession_evidenceNDBBX284606
Public_nameC47D2.5
DB_infoDatabaseNDBlocus_tagCELE_C47D2.5
NCBIgene13221737
RefSeqproteinNR_071645.1
RNAcentralURSidURS00005C7414
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:22WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
Allele (14)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies. Is affected by mrps-5 based on RNA-seq studies. Is affected by Oligosaccharides based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptC47D2.5
Experimental_infoExpression_clusterWBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00062103:neuron_enriched
WBPaper00064306:Agaro-oligosaccharides_upregulated
Map_infoPositivePositive_cloneC47D2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-0.362929
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag6052
Curator_confirmedWBPerson4025
MethodGene