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WormBase Tree Display for Gene: WBGene00199882

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Name Class

WBGene00199882SMapS_parentSequenceF47C8
IdentityVersion1
NameSequence_nameF47C8.4
Molecular_nameF47C8.4
Other_nameCELE_F47C8.4Accession_evidenceNDBBX284606
Public_nameF47C8.4
DB_infoDatabaseNDBlocus_tagCELE_F47C8.4
NCBIgene13224211
RefSeqproteinNR_072733.1
RNAcentralURSidURS000054AFFF
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:22WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01499519
WBVar01499710
WBVar02151481
WBVar00526504
WBVar01498960
WBVar01500067
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons based on RNA-seq studies. Is affected by mrps-5 based on RNA-seq studies. Is affected by iron oxide nanoparticle and Oligosaccharides based on microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF47C8.4
Associated_featureWBsf654651
Experimental_infoExpression_clusterWBPaper00051437:Cit-SPIONs_downregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00062103:neuron_enriched
WBPaper00064306:Agaro-oligosaccharides_upregulated
Map_infoPositivePositive_cloneF47C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX22.4868
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag7027
Curator_confirmedWBPerson4025
MethodGene