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WormBase Tree Display for Gene: WBGene00199305

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Name Class

WBGene00199305SMapS_parentSequenceC39E9
IdentityVersion1
NameSequence_nameC39E9.18
Molecular_nameC39E9.18a
C39E9.18b
C39E9.18c
Other_nameCELE_C39E9.18Accession_evidenceNDBBX284604
Public_nameC39E9.18
DB_infoDatabaseNDBlocus_tagCELE_C39E9.18
NCBIgene13198798
RefSeqproteinNR_101970.1
NR_101972.1
NR_101971.1
RNAcentralURSidURS00002ADC9E
URS000046D575
URS00005ABA05
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:22WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
Allele (14)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by spt-16; sir-2.1; and let-60 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptC39E9.18a
C39E9.18b
C39E9.18c
Other_sequenceACC30054_1
EX547638.1
FC550271.1
Experimental_infoRNAi_resultWBRNAi00011794Inferred_automaticallyRNAi_primary
WBRNAi00029695Inferred_automaticallyRNAi_primary
Microarray_resultsSMD_C39E9.9
GPL21109_C39E9.18a
GPL21109_C39E9.18b
Expression_clusterWBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
cgc4489_group_16
WBPaper00026929:sir-2.1_overexpression_regulated
[cgc5376]:let-60(G12V)-regulated_genes
Map_infoPositivePositive_cloneC39E9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV7.82714
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag3284
Curator_confirmedWBPerson4025
MethodGene