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WormBase Tree Display for Gene: WBGene00198307

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Name Class

WBGene00198307SMapS_parentSequenceF12F6
IdentityVersion1
NameSequence_nameF12F6.15
Molecular_nameF12F6.15
Other_nameCELE_F12F6.15Accession_evidenceNDBBX284604
Public_nameF12F6.15
DB_infoDatabaseNDBlocus_tagCELE_F12F6.15
NCBIgene13198229
RefSeqproteinNR_056669.1
RNAcentralURSidURS000045CE8C
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:21WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
Allele (11)
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in NSM based on RNA-seq studies. Is affected by cep-1; dlc-1; and set-2 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptF12F6.15
Associated_featureWBsf652227
WBsf652228
WBsf652229
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_downregulated_UV
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00055334:DLC-1_interacting
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
Map_infoPositivePositive_cloneF12F6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV5.00385
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag3139
Curator_confirmedWBPerson4025
MethodGene