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WormBase Tree Display for Gene: WBGene00196780

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Name Class

WBGene00196780SMapS_parentSequenceC17E4
IdentityVersion1
NameSequence_nameC17E4.15
Molecular_nameC17E4.15
Other_nameCELE_C17E4.15Accession_evidenceNDBBX284601
Public_nameC17E4.15
DB_infoDatabaseNDBlocus_tagCELE_C17E4.15
NCBIgene13181463
RefSeqproteinNR_050377.1
RNAcentralURSidURS00001CCF86
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Oct 2010 16:59:20WBPerson4025EventCreated
StatusLive
Gene_infoBiotypeSO:0001263
AlleleWBVar01500105
WBVar01499739
WBVar01499786
WBVar01499054
WBVar01498873
WBVar00341988
WBVar01498959
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionEnriched in neurons and sensory neurons based on RNA-seq studies. Is affected by cep-1; etr-1; and lpd-3 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptC17E4.15
Experimental_infoExpression_clusterWBPaper00045380:cep-1(gk138)_upregulated_normal
WBPaper00045380:cep-1(gk138)_upregulated_UV
WBPaper00060661:sensory-neuron_enriched
WBPaper00062103:neuron_enriched
WBPaper00062325:muscle_enriched_noncoding-RNA
WBPaper00064661:lpd-3(ok2138)_upregulated
Map_infoPositivePositive_cloneC17E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI3.76081
Remark[101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper.Paper_evidenceWBPaper00037953
Accession_evidencemodENCODEncRNA_frag390
Curator_confirmedWBPerson4025
MethodGene