WormBase Tree Display for Gene: WBGene00196176
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| WBGene00196176 | SMap | S_parent | Sequence | T28B11 | ||||
|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | ||||||
| Name | Sequence_name | T28B11.7 | ||||||
| Molecular_name | T28B11.7 | |||||||
| Other_name | CELE_T28B11.7 | Accession_evidence | NDB | BX284605 | ||||
| Public_name | T28B11.7 | |||||||
| DB_info | Database | NDB | locus_tag | CELE_T28B11.7 | ||||
| NCBI | gene | 13214904 | ||||||
| RefSeq | protein | NR_069341.1 | ||||||
| RNAcentral | URSid | URS00001F0C24 | ||||||
| Species | Caenorhabditis elegans | |||||||
| History | Version_change | 1 | 06 Oct 2010 16:59:19 | WBPerson4025 | Event | Created | ||
| Status | Live | |||||||
| Gene_info | Biotype | SO:0001263 | ||||||
| Allele (13) | ||||||||
| RNASeq_FPKM (74) | ||||||||
| Structured_description | Automated_description | Enriched in neurons and sensory neurons based on RNA-seq studies. Is affected by cep-1 and lpd-3 based on RNA-seq studies. Is affected by Cry5B; silicon dioxide nanoparticle; and Oligosaccharides based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||
| Curator_confirmed | WBPerson324 | |||||||
| WBPerson37462 | ||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
| Molecular_info | Corresponding_transcript | T28B11.7 | ||||||
| Associated_feature | WBsf653025 | |||||||
| Experimental_info | Expression_cluster | WBPaper00045380:cep-1(gk138)_downregulated_UV | ||||||
| WBPaper00045380:cep-1(gk138)_upregulated_normal | ||||||||
| WBPaper00053368:F.oxysporum_regulated | ||||||||
| WBPaper00056167:Cry5B_downregulated | ||||||||
| WBPaper00060100:SiNP_upregulated_mRNA | ||||||||
| WBPaper00060661:sensory-neuron_enriched | ||||||||
| WBPaper00062103:neuron_enriched | ||||||||
| WBPaper00064306:Agaro-oligosaccharides_upregulated | ||||||||
| WBPaper00064494:postdauer_upregulated_WholeAnimal | ||||||||
| WBPaper00064661:lpd-3(ok2138)_upregulated | ||||||||
| Map_info | Positive | Positive_clone | T28B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Interpolated_map_position | V | 2.74312 | ||||||
| Remark | [101006] This ncRNA gene was created from the '7K ncRNA set' in the modENCODE Integrated Analysis paper. | Paper_evidence | WBPaper00037953 | |||||
| Accession_evidence | modENCODE | ncRNA_frag4018 | ||||||
| Curator_confirmed | WBPerson4025 | |||||||
| Method | Gene |
