WormBase Tree Display for Gene: WBGene00193961

WBGene00193961 SMap: S_parent: Sequence: Cbre_Contig194
  Identity: Version: 2
    Name: CGC_name: Cbn-col-109 From_analysis: Inferred_from_orthology
      Sequence_name: CBN31996
      Molecular_name: CBN31996
        CBN31996.1
        CN32950
      Public_name: Cbn-col-109
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-col-109
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.8853 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.7706 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 148.53 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        28.3982 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        45.326 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        47.2516 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        54.4156 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 419.239 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        458.437 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        497.635 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 36.9796 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        75.5846 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (27)
    Paralog (189)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Collagen triple helix repeat and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans col-109. In C. elegans, col-109 is involved in IRE1-mediated unfolded protein response. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN31996
    Corresponding_transcript: CBN31996.1
    Other_sequence (61)
  Experimental_info: Microarray_results: GPL14142_CBN31996_28-87_0.885_4_A
      GPL14142_CBN31996_377-436_0.804_14_C
      GPL14142_CBN31996_381-440_0.859_7_B
  Method: Gene