WormBase Tree Display for Gene: WBGene00193709

WBGene00193709 SMap: S_parent: Sequence: Cbre_Contig254
  Identity: Version: 3
    Name: CGC_name: Cbn-ifc-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN31744
      Molecular_name: CBN31744
        CBN31744.1
        CN37596
      Public_name: Cbn-ifc-2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 24 Nov 2009 10:38:53 WBPerson615 Event: Acquires_merge: WBGene00191310
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-ifc-2
      Acquires_merge: WBGene00191310
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ifc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.220395 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.440789 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        42.3564 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        53.092 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        57.6511 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        63.7786 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        71.4002 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 42.6655 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        44.1977 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        45.7298 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 32.7019 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        33.1392 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (21)
    Paralog (12)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Intermediate filament, rod domain and Intermediate filament protein. Is an ortholog of C. elegans ifc-2. In C. elegans, ifc-2 is involved in post-embryonic digestive tract morphogenesis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN31744
    Corresponding_CDS_history: CBN31744:np203
      CBN31744:np209
    Corresponding_transcript: CBN31744.1
    Other_sequence: CBC03886_1
      CBC09732_1
      JI174085.1
      CR07924
      FD516689.1
      Dviv_isotig27693
      CJC02211_1
      CSC00034_1
      CRC05750_1
  Experimental_info: Microarray_results: GPL14142_CBN29345_638-697_0.843_62_C
      GPL14142_CBN29345_844-903_0.898_28_A
      GPL14142_CBN29345_1025-1084_0.786_109_B
      GPL14142_CBN31744_1125-1184_0.931_2_B
      GPL14142_CBN31744_1522-1581_0.953_1_A
      GPL14142_CBN31744_1526-1585_0.930_3_C
  Method: Gene