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WormBase Tree Display for Gene: WBGene00190254

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Name Class

WBGene00190254SMapS_parentSequenceCbre_Contig438
IdentityVersion3
NameCGC_nameCbn-gon-1.1From_analysisInferred_from_orthology
Sequence_nameCBN28289
Molecular_nameCBN28289
CBN28289.1
CN37554
Public_nameCbn-gon-1.1
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:52WBPerson1847EventCreated
222 Dec 2009 10:47:12WBPerson615EventAcquires_mergeWBGene00190387
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-gon-1.1
Acquires_mergeWBGene00190387
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classgon
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040.421656From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0.843313From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
2.32099From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
2.92589From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
3.51443From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
5.42081From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
6.60083From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
WBls:00000382.71971From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
2.84626From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
2.9728From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001011.55671From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
1.5906From_analysisRNASeq.brenneri.total_over_all_stages.control_median
GO_annotation00225852
00225853
00225854
00225855
00225856
Ortholog (40)
ParalogWBGene00138810Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00139551Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141125Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00141131Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00141247Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00149214Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00159412Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162812Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00164810Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193533Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable metalloendopeptidase activity and zinc ion binding activity. Predicted to be involved in extracellular matrix organization and proteolysis. Is an ortholog of C. elegans gon-1. In C. elegans, gon-1 is involved in several processes, including endoplasmic reticulum to Golgi vesicle-mediated transport; muscle organ morphogenesis; and negative regulation of presynapse assembly.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN28289
Corresponding_CDS_historyCBN28289:np210
Corresponding_transcriptCBN28289.1
Other_sequenceCBC09661_1
BMC02512_1
Dviv_isotig16135
Hbac_isotig07485
MethodGene