WormBase Tree Display for Gene: WBGene00185090

WBGene00185090 SMap: S_parent: Sequence: Cbre_Contig122
  Identity: Version: 2
    Name: CGC_name: Cbn-taf-6.2.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN26402
      Molecular_name: CBN26402
        CBN26402.1
        CN31958
      Public_name: Cbn-taf-6.2.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 13 Mar 2009 13:55:58 WBPerson615 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-taf-6.2.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: taf
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 14.548 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        29.0961 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.54985 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        2.67194 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        2.76164 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        2.76833 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        3.26011 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 3.03612 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        4.26524 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.49436 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 3.88014 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        5.23592 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00225520
      00225521
      00225522
      00225523
      00225524
      00225525
    Ortholog (29)
    Paralog: WBGene00140662 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00154092 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA polymerase II general transcription initiation factor activity and protein heterodimerization activity. Predicted to be involved in transcription initiation at RNA polymerase II promoter. Predicted to be part of SAGA complex; SLIK (SAGA-like) complex; and transcription factor TFIID complex. Is an ortholog of C. elegans taf-6.2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN26402
    Corresponding_transcript: CBN26402.1
    Other_sequence: CR00607
      CRC02920_1
  Experimental_info: Microarray_results: GPL14142_CBN01937_942-1001_0.746_204_A
      GPL14142_CBN01937_2077-2136_0.570_403_C
      GPL14142_CBN01937_2207-2266_0.898_30_B
  Method: Gene