WormBase Tree Display for Gene: WBGene00185029

WBGene00185029 SMap: S_parent: Sequence: Cbre_Contig905
  Identity: Version: 2
    Name: CGC_name: Cbn-txl-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN26353
      Molecular_name: CBN26353
        CBN26353.1
        CN32045
      Public_name: Cbn-txl-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 27 Feb 2009 10:18:11 WBPerson615 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-txl-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: txl
    RNASeq_FPKM: WBls:0000002 0.246689 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.458948 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        0.574548 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.690148 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
        2.26005 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
        2.56521 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        2.57877 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
        9.57905 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        9.83848 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
      WBls:0000004 0.53206 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        1.06412 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        2.94131 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        3.25141 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        4.21824 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        4.29213 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        4.50884 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
      WBls:0000038 3.01331 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        3.04347 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.07364 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (12)
      WBls:0000101 1.06412 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.61462 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (27)
    Paralog: WBGene00153919 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194302 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00141214 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00149873 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00160914 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00153959 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Thioredoxin; PITH domain; Thioredoxin domain; PITH domain superfamily; and Thioredoxin-like superfamily. Is an ortholog of C. elegans txl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN26353
    Corresponding_transcript: CBN26353.1
    Other_sequence (20)
  Method: Gene