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WormBase Tree Display for Gene: WBGene00172457

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Name Class

WBGene00172457SMapS_parentSequenceY105C5A
IdentityVersion1
NameCGC_name21ur-5910
Sequence_nameY105C5A.1082
Molecular_nameY105C5A.1082
Other_nameCELE_Y105C5A.1082Accession_evidenceNDBBX284604
Public_name21ur-5910
DB_infoDatabaseNDBlocus_tagCELE_Y105C5A.1082
NCBIgene13206051
RefSeqproteinNR_063647.1
RNAcentralURSidURS00002A1AB4
SpeciesCaenorhabditis elegans
HistoryVersion_change106 Nov 2008 15:18:50WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001638
Gene_class21ur
AlleleWBVar01499527
WBVar01498996
WBVar01499367
WBVar01498262
WBVar01499368
WBVar01499925
WBVar01498687
WBVar01499693
WBVar01500245
WBVar01499697
RNASeq_FPKM (74)
Structured_descriptionAutomated_descriptionIs affected by smn-1 and lpd-3 based on RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_transcriptY105C5A.1082
Experimental_infoExpression_clusterWBPaper00056809:smn-1(ok355)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064871:PA14_upregulated_AWA
Map_infoMapIVPosition14.241
PositivePositive_cloneY105C5AInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene