WormBase Tree Display for Gene: WBGene00163546

WBGene00163546 SMap: S_parent: Sequence: Cbre_Contig208
  Identity: Version: 2
    Name: CGC_name: Cbn-emb-27 From_analysis: Inferred_from_orthology
      Sequence_name: CBN24821
      Molecular_name: CBN24821
        CBN24821.1
        CN37219
      Public_name: Cbn-emb-27
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-emb-27
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: emb
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 17.2537 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        8.62685 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        3.81837 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        4.02777 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        4.03238 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        7.19611 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        8.81218 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
      WBls:0000038 4.6233 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        5.28547 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        5.94765 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 8.49167 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        9.46862 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (30)
    Paralog: WBGene00140327 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00141589 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00147818 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00149442 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153690 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Tetratricopeptide-like helical domain superfamily and Tetratricopeptide repeat. Is an ortholog of C. elegans emb-27. In C. elegans, emb-27 is involved in asymmetric cell division; eggshell formation; and polarity specification of anterior/posterior axis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN24821
    Corresponding_CDS_history: CBN24821:np208
    Corresponding_transcript: CBN24821.1
    Other_sequence: JI166192.1
      CGC00469_1
      CRC03418_1
      CR05775
      CRC06574_1
  Experimental_info: Microarray_results: GPL14142_CBN01602_1513-1572_0.709_151_A
      GPL14142_CBN24821_1229-1288_0.933_1_A
  Method: Gene