WormBase Tree Display for Gene: WBGene00163093

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WBGene00163093	SMap	S_parent	Sequence	Cbre_Contig33
	Identity	Version	1
		Name	CGC_name	Cbn-unc-68	From_analysis	Inferred_from_orthology
			Sequence_name	CBN24368
			Molecular_name	CBN24368
				CBN24368.1
				CN37795
			Other_name	CBN24368
			Public_name	Cbn-unc-68
		Species	Caenorhabditis brenneri
		History	Version_change	1	30 Oct 2008 10:39:28	WBPerson4055	Event	Imported	from NGASP
							Name_change	CGC_name	Cbn-unc-68
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	unc
		RNASeq_FPKM	WBls:0000002	0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
						RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
				3.03448	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
				5.19058	From_analysis	RNASeq.brenneri.WBls:0000002.control_mean
				6.27072	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
				6.33522	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
				6.38481	From_analysis	RNASeq.brenneri.WBls:0000002.control_median
				6.43439	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
				6.49515	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
				6.74348	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
				8.20043	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
				8.39192	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
			WBls:0000004	1.44702	From_analysis	RNASeq.brenneri.WBls:0000004.control_mean
						RNASeq.brenneri.WBls:0000004.control_median
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
				2.89405	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
			WBls:0000024	19.1547	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
				24.2565	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
				28.4481	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
				32.4589	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
				32.5008	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
			WBls:0000038	7.28533	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
				7.70604	From_analysis	RNASeq.brenneri.WBls:0000038.control_mean
						RNASeq.brenneri.WBls:0000038.control_median
				8.12674	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
			WBls:0000041	1.43709	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
				1.59924	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
						RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
				2.68931	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
				3.04666	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
				3.34059	From_analysis	RNASeq.brenneri.WBls:0000041.control_mean
				3.46346	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
				3.48345	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
				3.48574	From_analysis	RNASeq.brenneri.WBls:0000041.control_median
				3.48804	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
				3.65418	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
				4.01203	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
				4.44324	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
				5.08801	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
				5.32888	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
				5.56321	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
				6.15263	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
			WBls:0000101	3.65418	From_analysis	RNASeq.brenneri.total_over_all_stages.control_median
				3.98907	From_analysis	RNASeq.brenneri.total_over_all_stages.control_mean
		GO_annotation	00221928
			00221929
			00221930
			00221931
			00221932
			00221933
			00221934
			00221935
			00221936
			00221937
		Ortholog	WBGene00006801	Caenorhabditis elegans	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00038324	Caenorhabditis briggsae	From_analysis	OMA
						Inparanoid_8
						WormBase-Compara
			WBGene00052257	Caenorhabditis remanei	From_analysis	OMA
						TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00124340	Caenorhabditis japonica	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
			CBOVI.g2262	Caenorhabditis bovis	From_analysis	WormBase-Compara
			CSP21.g4665	Caenorhabditis parvicauda	From_analysis	WormBase-Compara
			CSP26.g3330	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g8818	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g5594	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP31.g19710	Caenorhabditis uteleia	From_analysis	WormBase-Compara
			CSP32.g10857	Caenorhabditis sulstoni	From_analysis	WormBase-Compara
			CSP38.g1182	Caenorhabditis quiockensis	From_analysis	WormBase-Compara
			CSP39.g12556	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP39.g19315	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP39.g4569	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g21529	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cang_2012_03_13_00439.g10869	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_01390.g16355	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_02379.g17124	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_02506.g17262	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_04140.g18630	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_05389.g19560	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_06964.g20594	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_10065.g22436	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_13819.g24396	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_16100.g25259	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cang_2012_03_13_18335.g25942	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cni-unc-68	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Cnig_chr_V.g19947	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			Csp11.Scaffold556.g3752	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp11.Scaffold556.g3753	Caenorhabditis tropicalis	From_analysis	WormBase-Compara
			Csp5_scaffold_00905.g16628	Caenorhabditis sinica	From_analysis	WormBase-Compara
			FL83_15641	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_018015	Caenorhabditis remanei	From_analysis	WormBase-Compara
			OTIPU.nOt.2.0.1.g10076	Oscheius tipulae	From_analysis	WormBase-Compara
			Pan_g4808	Panagrellus redivivus	From_analysis	WormBase-Compara
			Pan_g4810	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_50223100	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			WBGene00225260	Brugia malayi	From_analysis	WormBase-Compara
			chrV_pilon.g14545	Caenorhabditis elegans	From_analysis	WormBase-Compara
			WBGene00209587	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00216080	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00218877	Caenorhabditis japonica	From_analysis	WormBase-Compara
			WBGene00245273	Onchocerca volvulus	From_analysis	WormBase-Compara
			WBGene00276305	Pristionchus pacificus	From_analysis	WormBase-Compara
			WBGene00256983	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00296466	Trichuris muris	From_analysis	WormBase-Compara
			WBGene00296467	Trichuris muris	From_analysis	WormBase-Compara
			WBGene00301423	Trichuris muris	From_analysis	WormBase-Compara
		Paralog	WBGene00193580	Caenorhabditis brenneri	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00191347	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00192195	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00193883	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00193891	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
		Structured_description	Automated_description	Predicted to enable calcium ion binding activity and ryanodine-sensitive calcium-release channel activity. Predicted to be involved in calcium ion transmembrane transport and intracellular calcium ion homeostasis. Predicted to be located in membrane. Is an ortholog of C. elegans unc-68. In C. elegans, unc-68 is involved in locomotion; positive regulation of programmed cell death; and protein localization to organelle.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CBN24368
		Corresponding_CDS_history	CBN24368:np212
		Corresponding_transcript	CBN24368.1
		Other_sequence	MHC10953_1
			CGC00447_1
			ACC24297_1
			EY471765.1
			Tcol_isotig13464
			MH00533
			Dviv_isotig31562
			ACC32005_1
			MHC01824_1
			Oden_isotig02448
			MC01547
			MIC00484_1
			MH04861
			CRC02192_1
			MH00548
			CR08871
			AS09195
			MCC03841_1
			HBC10268_1
			MCC00196_1
			Dviv_isotig26223
			MC00131
			Tcol_isotig06757
			BXC02685_1
			Oden_isotig02449
			CR08872
			Tcol_isotig21968
			MH04786
			FG587269.1
			JI163779.1
			Acan_isotig13771
			JI468091.1
			MHC01328
			Oden_isotig02451
			ASC06046_1
			MIC00292_1
			JO469349.1
			MHC01250_1
			MH06345
			Hbac_isotig01873
			FG580757.1
			Tcir_isotig09614
			Dviv_isotig29505
			JI464804.1
			MHC11325_1
			MHC05560_1
			Acan_isotig10352
			EY458385.1
			MI00540
			Oden_isotig02450
			ES743277.1
	Experimental_info	Microarray_results	GPL14142_CBN24368_15657-15716_0.932_10_B
			GPL14142_CBN24368_15730-15789_0.950_4_C
			GPL14142_CBN24368_15797-15856_0.968_1_A
			GPL14142_CBN31926_3519-3578_0.904_5_B
			GPL14142_CBN31926_3529-3588_0.904_4_A
	Method	Gene