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WormBase Tree Display for Gene: WBGene00161544

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Name Class

WBGene00161544SMapS_parentSequenceCbre_Contig11
IdentityVersion5
NameSequence_nameCBN22819
Molecular_nameCBN22819
CBN22819.1
CN14154
Public_nameCBN22819
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-clec-260
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
404 Feb 2020 15:43:56WBPerson1983Name_changeCGC_nameCbn-clec-124
504 Jun 2020 14:38:22WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.736436From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0.763849From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
RNASeq.brenneri.WBls:0000002.control_median
6.60051From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000380.84696From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
1.27431From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
1.70167From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (11)
WBls:00001010From_analysisRNASeq.brenneri.total_over_all_stages.control_median
3.40001From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00083415Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CSP21.g6726Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP38.g17532Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g8244Caenorhabditis quiockensisFrom_analysisWormBase-Compara
Cang_2012_03_13_00417.g10557Caenorhabditis angariaFrom_analysisWormBase-Compara
FL83_24179Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001670Caenorhabditis remaneiFrom_analysisWormBase-Compara
Paralog (143)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN22819
Corresponding_transcriptCBN22819.1
Experimental_infoMicroarray_resultsGPL14142_CBN22819_474-533_0.740_61_A
Remark[190208 pad] The CGC name Cbn-clec-260 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200603 pad] The CGC name Cbn-clec-124 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene