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WormBase Tree Display for Gene: WBGene00161105

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Name Class

WBGene00161105SMapS_parentSequenceCbre_Contig88
IdentityVersion1
NameSequence_nameCBN22380
Molecular_nameCBN22380
CBN22380.1
CN13021
Public_nameCBN22380
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:52WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020.380809From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0.474303From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
18.6384From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
1.94935From_analysisRNASeq.brenneri.WBls:0000002.control_mean
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
RNASeq.brenneri.WBls:0000002.control_median
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
RNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240.223836From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
0.441373From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0.497693From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:000003848.5491From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
48.8804From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
49.2117From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:00000410.692011From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
0.737657From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
0.934692From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
12.78From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
13.2227From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
13.5013From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
13.67From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
14.7619From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
15.211From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
1.93804From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
2.73434From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
3.75337From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
3.93416From_analysisRNASeq.brenneri.WBls:0000041.control_median
4.11495From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
6.71403From_analysisRNASeq.brenneri.WBls:0000041.control_mean
9.37257From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
WBls:00001010.737657From_analysisRNASeq.brenneri.total_over_all_stages.control_median
7.2477From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00007807Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00011487Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00036011Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00038664Caenorhabditis briggsaeFrom_analysisOMA
WBGene00041129Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00066793Caenorhabditis remaneiFrom_analysisOMA
WBGene00072853Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00080656Caenorhabditis remaneiFrom_analysisOMA
WBGene00081996Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00180774Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00213688Caenorhabditis japonicaFrom_analysisInparanoid_8
CBOVI.g11444Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g2236Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2237Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g3674Caenorhabditis uteleiaFrom_analysisWormBase-Compara
Cang_2012_03_13_00161.g5960Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21325Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21327Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21328Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21330Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16265Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16266Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00772.g15334Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00772.g15335Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03491.g30367Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_06166.g36164Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_015656Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020865Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g12996Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23479Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00011844Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00014194Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g16783Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g16794Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g17360Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g17409Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291007Trichuris murisFrom_analysisWormBase-Compara
WBGene00302102Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139520Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00139912Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00140617Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00141027Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00141778Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00142581Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00142745Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00144922Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00147499Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00148147Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00148221Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
GeneACeDB-Compara
WBGene00148479Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00149780Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00150984Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151802Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00151844Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00154457Caenorhabditis brenneriFrom_analysisTreeFam
GeneACeDB-Compara
WBGene00155199Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00155952Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00156867Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00157541Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00157707Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00158736Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00159041Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00159413Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00159797Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00163397Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00194595Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00192294Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00161562Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00185081Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00191329Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00164838Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00164545Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150248Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00156455Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158889Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190851Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00155589Caenorhabditis brenneriFrom_analysisGeneACeDB-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domain: CUB-like domain. Is an ortholog of C. elegans C29F3.7 and T05E12.6. In C. elegans, C29F3.7 is involved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN22380
Corresponding_transcriptCBN22380.1
Other_sequenceCR01590
Experimental_infoMicroarray_resultsGPL14142_CBN22380_586-645_0.689_171_A
MethodGene