WormBase Tree Display for Gene: WBGene00158152

WBGene00158152 SMap: S_parent: Sequence: Cbre_Contig896
  Identity: Version: 2
    Name: CGC_name: Cbn-ced-5.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN19427
      Molecular_name: CBN19427
        CBN19427.1
        CN09755
      Other_name: CBN19427
        Cbn-ced-5 From_analysis: Inferred_from_orthology
      Public_name: Cbn-ced-5.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ced-5
        2 20 Mar 2018 10:26:13 WBPerson4025 Name_change: CGC_name: Cbn-ced-5.2
                Other_name: Cbn-ced-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ced
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 12.5657 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        6.28285 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 1.11247 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        1.27342 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        1.75304 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        1.76035 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        1.79189 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 2.92284 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        3.02227 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        3.12171 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 2.92284 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.78675 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00217895
      00217896
    Ortholog (33)
    Paralog: WBGene00139642 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139428 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00158742 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159215 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00160740 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00163437 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans ced-5. In C. elegans, ced-5 is involved in several processes, including left/right axis specification; positive regulation of distal tip cell migration; and vesicle-mediated transport. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN19427
    Corresponding_transcript: CBN19427.1
    Other_sequence: Acan_isotig17700
      Tcol_isotig19211
      CJC04097_1
      Acan_isotig08629
      FC550491.1
      Oden_isotig27855
      ACC03637_1
      EX563741.1
      Oden_isotig23377
  Method: Gene