WormBase Tree Display for Gene: WBGene00156217

WBGene00156217 SMap: S_parent: Sequence: Cbre_Contig128
  Identity: Version: 2
    Name: CGC_name: Cbn-smk-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN17492
      Molecular_name: CBN17492
        CBN17492.1
        CN30541
      Public_name: Cbn-smk-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-smk-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: smk
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 119.516 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        59.758 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        30.3608 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        38.7196 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        38.7927 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        44.507 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        53.3865 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 17.1819 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        18.3194 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        19.4569 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 17.4472 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        24.4437 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (34)
    Paralog: WBGene00191156 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: PH-like domain superfamily; Phosphatase 4 regulatory subunit 3; Domain of unknown function DUF625; and Armadillo-type fold. Is an ortholog of C. elegans smk-1. In C. elegans, smk-1 is involved in several processes, including defense response to bacterium; negative regulation of mitotic DNA damage checkpoint; and response to radiation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN17492
    Corresponding_CDS_history: CBN17492:np197
    Corresponding_transcript: CBN17492.1
    Other_sequence (21)
  Experimental_info: Microarray_results: GPL14142_CBN17492_2752-2811_0.690_247_B
      GPL14142_CBN17492_2904-2963_0.875_19_A
      GPL14142_CBN17492_3429-3488_0.761_142_C
  Method: Gene