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WormBase Tree Display for Gene: WBGene00155354

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Name Class

WBGene00155354SMapS_parentSequenceCbre_Contig12
IdentityVersion1
NameCGC_nameCbn-unc-16From_analysisInferred_from_orthology
Sequence_nameCBN16629
Molecular_nameCBN16629
CBN16629.1
CN19525
Other_nameCBN16629
Public_nameCbn-unc-16
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-unc-16
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000213.0241From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
13.1186From_analysisRNASeq.brenneri.WBls:0000002.control_mean
13.6488From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
14.7065From_analysisRNASeq.brenneri.WBls:0000002.control_median
15.7643From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
18.6996From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
19.124From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
19.2739From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
22.3152From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
9.33564From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
WBls:000000415.6434From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
7.8217From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
38.849From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
47.6776From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
72.8737From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
73.5002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
81.6437From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003818.6195From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
19.1943From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
19.7692From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:000004111.2265From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
14.6129From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
18.6749From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
24.4669From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
24.6412From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
24.7114From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
24.9089From_analysisRNASeq.brenneri.WBls:0000041.control_median
25.1064From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
25.4209From_analysisRNASeq.brenneri.WBls:0000041.control_mean
26.3489From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
30.639From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
32.7794From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
34.4558From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
35.7278From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
50.1796From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
53.1633From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
WBls:000010118.6996From_analysisRNASeq.brenneri.total_over_all_stages.control_median
19.0952From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00215582
OrthologWBGene00006755Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00031535Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00055072Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131083Caenorhabditis japonicaFrom_analysisTreeFam
CBOVI.g4785Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11960Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g11962Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP21.g8331Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13081Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14075Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3247Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g25794Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10771Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g11106Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g16677Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g19327Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28896Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8986Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3391Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10607Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00420.g10608Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-16Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18365Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00327.g9470Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07385Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009458Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03995Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7946Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30194800Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00098027Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00227885Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g8646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00180758Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245554Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00261014Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293684Trichuris murisFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable MAP-kinase scaffold activity. Is an ortholog of C. elegans unc-16. In C. elegans, unc-16 is involved in several processes, including defecation; egg-laying behavior; and regulation of JNK cascade.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN16629
Corresponding_transcriptCBN16629.1
Other_sequenceACC06795_1
JO472375.1
Tcir_isotig28611
JI165046.1
FF678842.1
FK809211.1
FE911952.1
Dviv_isotig09852
BM00818
CRC04177_1
JI164967.1
JI479761.1
JI466840.1
FC552533.1
Tcol_isotig09960
HG00390
ES272948.1
JI482653.1
HBC04940_1
TM02073
TSC12465_1
CR08132
Tcol_isotig20122
SRC04651_1
JI170505.1
JO470038.1
JI476939.1
Acan_isotig07781
ACC21273_1
FG619057.1
Dviv_isotig09853
MIC02311_1
JI461688.1
BE191646.1
TMC01839_1
RSC01640_1
CRC02473_1
Hbac_isotig02332
FC821946.1
AM744248.1
JI474292.1
DR121003.1
Oden_isotig18789
JI481874.1
Oden_isotig27988
Oden_isotig19058
SCC00020_1
FC542608.1
NAC01936_1
CR08371
RS07074
Dviv_isotig22163
BMC13064_1
JI470548.1
FC552215.1
Dviv_isotig09854
SRC05276_1
FC552042.1
BXC05978_1
ASC01858_1
BU087843.1
AS00685
OVC02991_1
SR03943
FE911058.1
Acan_isotig19593
BMC07339_1
SS01454
CJC00626_1
CRC01740_1
JI166846.1
OVC03630_1
EW741172.1
AW355767.1
SSC00015_1
FK802446.1
JI472155.1
TDC03085_1
MI02804
FC821330.1
HGC11317_1
JI462519.1
JI177924.1
FC819043.1
AW519333.1
JI483019.1
ES741383.1
FC552232.1
Experimental_infoMicroarray_resultsGPL14142_CBN16629_2141-2200_0.843_58_C
GPL14142_CBN16629_2236-2295_0.870_43_A
GPL14142_CBN16629_3410-3469_0.918_11_B
MethodGene