WormBase Tree Display for Gene: WBGene00154623

WBGene00154623 SMap: S_parent: Sequence: Cbre_Contig65
  Identity: Version: 6
    Name: CGC_name: Cbn-ric-4 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15898
      Molecular_name: CBN15898
        CBN15898.1
        CN21993
      Other_name: CBN15898
      Public_name: Cbn-ric-4
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-ric-4
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-sri-18
                Other_name: Cbn-ric-4
        3 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Cbn-sri-18
        5 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:27 WBPerson1983 Name_change: CGC_name: Cbn-ric-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ric
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.212435 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.42487 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        36.7632 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        36.764 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        38.857 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        40.8588 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        42.354 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 6.37745 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        7.67897 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        8.98049 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (15)
      WBls:0000101 2.1694 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        3.97005 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (33)
    Paralog: WBGene00151299 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00150772 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00141574 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00144259 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00144581 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00159308 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
      WBGene00193208 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Serpentine type 7TM GPCR chemoreceptor Sri; Target SNARE coiled-coil homology domain; SNAP-25 family; SNAP-25 domain; and 7TM GPCR, serpentine chemoreceptor class i (Sri). Is an ortholog of C. elegans ric-4. In C. elegans, ric-4 is involved in cholinergic synaptic transmission. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15898
    Corresponding_transcript: CBN15898.1
    Other_sequence (36)
  Experimental_info: Microarray_results: GPL14142_CBN15898_868-927_0.875_18_C
      GPL14142_CBN15898_1222-1281_0.866_25_A
      GPL14142_CBN15898_1471-1530_0.522_258_B
  Remark: [190208 pad] The CGC name Cbn-sri-18 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Cbn-sri-18 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    Removed duplicate Other_name Cbn-ric-4 Curator_confirmed: WBPerson1983
  Method: Gene