WormBase Tree Display for Gene: WBGene00153919

WBGene00153919 SMap: S_parent: Sequence: Cbre_Contig173
  Identity: Version: 2
    Name: CGC_name: Cbn-txl-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15194
      Molecular_name: CBN15194
        CBN15194.1
        CN27438
      Public_name: Cbn-txl-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:51 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-txl-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: txl
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 156.275 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        78.1375 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 11.2444 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        11.6725 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        11.7043 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        12.913 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        17.6518 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 108.055 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        117.752 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        98.3584 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 48.6954 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
        51.8193 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
    Ortholog (27)
    Paralog: WBGene00185029 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00194302 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00141214 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00149873 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00160914 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00153959 Caenorhabditis brenneri From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Galactose-binding-like domain superfamily; Thioredoxin; PITH domain; Thioredoxin domain; PITH domain superfamily; and Thioredoxin-like superfamily. Is an ortholog of C. elegans txl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15194
    Corresponding_CDS_history: CBN15194:np197
    Corresponding_transcript: CBN15194.1
    Other_sequence (50)
  Experimental_info: Microarray_results: GPL14142_CBN15194_366-425_0.914_10_B
      GPL14142_CBN15194_791-850_0.939_2_A
      GPL14142_CBN32337_348-407_0.931_3_A
  Method: Gene